RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 XBP1P17861 261 aa27.21■■□□□ 1.95
PFDN2-201ENST00000368010 SMAD3P84022 425 aaKnown RBP27.21■■□□□ 1.95
PFDN2-201ENST00000368010 ZNF200P98182 395 aaPredicted RBP27.21■■□□□ 1.95
PFDN2-201ENST00000368010 RBL2Q08999 1139 aa27.21■■□□□ 1.95
PFDN2-201ENST00000368010 ITGB3BPQ13352 177 aaPredicted RBP27.21■■□□□ 1.95
PFDN2-201ENST00000368010 HIC1Q14526 733 aa27.21■■□□□ 1.95
PFDN2-201ENST00000368010 BLIDQ8IZY5 108 aa27.21■■□□□ 1.95
PFDN2-201ENST00000368010 NECAB1Q8N987 351 aa27.21■■□□□ 1.95
PFDN2-201ENST00000368010 DAGLBQ8NCG7 672 aa27.21■■□□□ 1.95
PFDN2-201ENST00000368010 LARGE1O95461 756 aa27.2■■□□□ 1.94
PFDN2-201ENST00000368010 CTDNEP1O95476 244 aa27.2■■□□□ 1.94
PFDN2-201ENST00000368010 HOXC8P31273 242 aa27.2■■□□□ 1.94
PFDN2-201ENST00000368010 HERVK_113Q902F9 699 aa27.2■■□□□ 1.94
PFDN2-201ENST00000368010 GLG1Q92896 1179 aa27.2■■□□□ 1.94
PFDN2-201ENST00000368010 ATP6V0A1Q93050 837 aa27.2■■□□□ 1.94
PFDN2-201ENST00000368010 RNPEPQ9H4A4 650 aa27.2■■□□□ 1.94
PFDN2-201ENST00000368010 SMARCAD1Q9H4L7 1026 aa27.2■■□□□ 1.94
PFDN2-201ENST00000368010 ERAP1Q9NZ08 941 aa27.2■■□□□ 1.94
PFDN2-201ENST00000368010 EMSYQ7Z589 1322 aa27.19■■□□□ 1.94
PFDN2-201ENST00000368010 GNAT1P11488 350 aa27.19■■□□□ 1.94
PFDN2-201ENST00000368010 SELPP16109 830 aa27.19■■□□□ 1.94
PFDN2-201ENST00000368010 CIITAP33076 1130 aa27.19■■□□□ 1.94
PFDN2-201ENST00000368010 ACTR2P61160 394 aa27.19■■□□□ 1.94
PFDN2-201ENST00000368010 RASIP1Q5U651 963 aa27.19■■□□□ 1.94
PFDN2-201ENST00000368010 LRRC8DQ7L1W4 858 aa27.19■■□□□ 1.94
PFDN2-201ENST00000368010 DEFB128Q7Z7B8 93 aa27.19■■□□□ 1.94
PFDN2-201ENST00000368010 SERINC5Q86VE9 423 aa27.19■■□□□ 1.94
PFDN2-201ENST00000368010 WASF1Q92558 559 aa27.19■■□□□ 1.94
PFDN2-201ENST00000368010 ORC3Q9UBD5 711 aaPredicted RBP27.19■■□□□ 1.94
PFDN2-201ENST00000368010 TANC1Q9C0D5 1861 aa27.19■■□□□ 1.94
PFDN2-201ENST00000368010 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.18■■□□□ 1.94
PFDN2-201ENST00000368010 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.18■■□□□ 1.94
PFDN2-201ENST00000368010 IPO5O00410 1097 aaKnown RBP27.18■■□□□ 1.94
PFDN2-201ENST00000368010 CKBP12277 381 aa27.18■■□□□ 1.94
PFDN2-201ENST00000368010 PRR16Q569H4 304 aa27.18■■□□□ 1.94
PFDN2-201ENST00000368010 OTOP2Q7RTS6 562 aa27.18■■□□□ 1.94
PFDN2-201ENST00000368010 ZNF577Q9BSK1 485 aa27.18■■□□□ 1.94
PFDN2-201ENST00000368010 AZI2Q9H6S1 392 aa27.18■■□□□ 1.94
PFDN2-201ENST00000368010 SETD4Q9NVD3 440 aa27.18■■□□□ 1.94
PFDN2-201ENST00000368010 KCNJ14Q9UNX9 436 aa27.18■■□□□ 1.94
PFDN2-201ENST00000368010 DDX39AO00148 427 aaKnown RBP27.17■■□□□ 1.94
PFDN2-201ENST00000368010 LGR5O75473 907 aa27.17■■□□□ 1.94
PFDN2-201ENST00000368010 MARK3P27448 753 aa27.17■■□□□ 1.94
PFDN2-201ENST00000368010 USP11P51784 963 aa27.17■■□□□ 1.94
PFDN2-201ENST00000368010 NPY5RQ15761 445 aa27.17■■□□□ 1.94
PFDN2-201ENST00000368010 TBCKQ8TEA7 893 aa27.17■■□□□ 1.94
PFDN2-201ENST00000368010 WNT8BQ93098 351 aa27.17■■□□□ 1.94
PFDN2-201ENST00000368010 VWCEQ96DN2 955 aa27.17■■□□□ 1.94
PFDN2-201ENST00000368010 NRCAMQ92823 1304 aa27.16■■□□□ 1.94
PFDN2-201ENST00000368010 M0R2N6 131 aa27.16■■□□□ 1.94
PFDN2-201ENST00000368010 TREHO43280 583 aa27.16■■□□□ 1.94
PFDN2-201ENST00000368010 DTNBO60941 627 aa27.16■■□□□ 1.94
PFDN2-201ENST00000368010 PARNO95453 639 aaKnown RBP27.16■■□□□ 1.94
PFDN2-201ENST00000368010 TRIM71Q2Q1W2 868 aaKnown RBP27.16■■□□□ 1.94
PFDN2-201ENST00000368010 DEFB123Q8N688 67 aa27.16■■□□□ 1.94
PFDN2-201ENST00000368010 PHF20Q9BVI0 1012 aa27.16■■□□□ 1.94
PFDN2-201ENST00000368010 TBC1D22BQ9NU19 505 aa27.16■■□□□ 1.94
PFDN2-201ENST00000368010 ACTN1P12814 892 aa27.15■■□□□ 1.94
PFDN2-201ENST00000368010 PPFIA1Q13136 1202 aa27.15■■□□□ 1.94
PFDN2-201ENST00000368010 FAM109BQ6ICB4 259 aaPredicted RBP27.15■■□□□ 1.94
PFDN2-201ENST00000368010 Q7L0L9 218 aa27.15■■□□□ 1.94
PFDN2-201ENST00000368010 KRT25Q7Z3Z0 450 aa27.15■■□□□ 1.94
PFDN2-201ENST00000368010 NSUN7Q8NE18 718 aaKnown RBP27.15■■□□□ 1.94
PFDN2-201ENST00000368010 LMBR1Q8WVP7 490 aa27.15■■□□□ 1.94
PFDN2-201ENST00000368010 PCYT2Q99447 389 aa27.15■■□□□ 1.94
PFDN2-201ENST00000368010 FTOQ9C0B1 505 aaKnown RBP eCLIP27.15■■□□□ 1.94
PFDN2-201ENST00000368010 CXXC1Q9P0U4 656 aaPredicted RBP27.15■■□□□ 1.94
PFDN2-201ENST00000368010 TCEAL9Q9UHQ7 104 aa27.15■■□□□ 1.94
PFDN2-201ENST00000368010 LIMCH1Q9UPQ0 1083 aa27.15■■□□□ 1.94
PFDN2-201ENST00000368010 DHX15O43143 795 aaKnown RBP27.14■■□□□ 1.94
PFDN2-201ENST00000368010 ATG7O95352 703 aa27.14■■□□□ 1.94
PFDN2-201ENST00000368010 CCNE2O96020 404 aa27.14■■□□□ 1.94
PFDN2-201ENST00000368010 THPOP40225 353 aa27.14■■□□□ 1.94
PFDN2-201ENST00000368010 RBM25P49756 843 aaKnown RBP27.14■■□□□ 1.94
PFDN2-201ENST00000368010 LENG9Q96B70 501 aa27.14■■□□□ 1.94
PFDN2-201ENST00000368010 UIMC1Q96RL1 719 aa27.14■■□□□ 1.94
PFDN2-201ENST00000368010 KIF2CQ99661 725 aa27.14■■□□□ 1.94
PFDN2-201ENST00000368010 UPF2Q9HAU5 1272 aaKnown RBP27.14■■□□□ 1.94
PFDN2-201ENST00000368010 ZBBXA8MT70 800 aa27.13■■□□□ 1.93
PFDN2-201ENST00000368010 EDIL3O43854 480 aa27.13■■□□□ 1.93
PFDN2-201ENST00000368010 FDPSP14324 419 aaKnown RBP27.13■■□□□ 1.93
PFDN2-201ENST00000368010 STAT5BP51692 787 aa27.13■■□□□ 1.93
PFDN2-201ENST00000368010 NONOQ15233 471 aaKnown RBP eCLIP27.13■■□□□ 1.93
PFDN2-201ENST00000368010 ZNF618Q5T7W0 954 aa27.13■■□□□ 1.93
PFDN2-201ENST00000368010 ZNF697Q5TEC3 545 aa27.13■■□□□ 1.93
PFDN2-201ENST00000368010 PLPPR4Q7Z2D5 763 aa27.13■■□□□ 1.93
PFDN2-201ENST00000368010 TNPO1Q92973 898 aaKnown RBP27.13■■□□□ 1.93
PFDN2-201ENST00000368010 GJB4Q9NTQ9 266 aa27.13■■□□□ 1.93
PFDN2-201ENST00000368010 SZT2Q5T011 3432 aa27.13■■□□□ 1.93
PFDN2-201ENST00000368010 ADAM17P78536 824 aa27.12■■□□□ 1.93
PFDN2-201ENST00000368010 GRIK4Q16099 956 aa27.12■■□□□ 1.93
PFDN2-201ENST00000368010 MIS18BP1Q6P0N0 1132 aa27.12■■□□□ 1.93
PFDN2-201ENST00000368010 SLC4A7Q9Y6M7 1214 aa27.12■■□□□ 1.93
PFDN2-201ENST00000368010 SCN5AQ14524 2016 aa27.12■■□□□ 1.93
PFDN2-201ENST00000368010 CCDC194A0A1B0GVG4 234 aa27.11■■□□□ 1.93
PFDN2-201ENST00000368010 BACH1O14867 736 aa27.11■■□□□ 1.93
PFDN2-201ENST00000368010 CAND2O75155 1236 aa27.11■■□□□ 1.93
PFDN2-201ENST00000368010 SLC26A2P50443 739 aa27.11■■□□□ 1.93
PFDN2-201ENST00000368010 KRT76Q01546 638 aa27.11■■□□□ 1.93
PFDN2-201ENST00000368010 FAM160B1Q5W0V3 765 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms