RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 TAB3Q8N5C8 712 aaPredicted RBP16.93■□□□□ 0.3
FBXO28-201ENST00000366862 DACT3Q96B18 629 aaPredicted RBP16.93■□□□□ 0.3
FBXO28-201ENST00000366862 TGS1Q96RS0 853 aaKnown RBP16.93■□□□□ 0.3
FBXO28-201ENST00000366862 A0A1W2PQC6 194 aa16.93■□□□□ 0.3
FBXO28-201ENST00000366862 WDR46O15213 610 aaKnown RBP16.93■□□□□ 0.3
FBXO28-201ENST00000366862 FOSP01100 380 aaPredicted RBP16.93■□□□□ 0.3
FBXO28-201ENST00000366862 KRT1P04264 644 aa16.93■□□□□ 0.3
FBXO28-201ENST00000366862 CCND1P24385 295 aa16.93■□□□□ 0.3
FBXO28-201ENST00000366862 NFRKBQ6P4R8 1299 aa16.93■□□□□ 0.3
FBXO28-201ENST00000366862 TRIM15Q9C019 465 aa16.93■□□□□ 0.3
FBXO28-201ENST00000366862 HPCAL4Q9UM19 191 aa16.93■□□□□ 0.3
FBXO28-201ENST00000366862 STK36Q9NRP7 1315 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 PYGBP11216 843 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 NCF2P19878 526 aaPredicted RBP16.92■□□□□ 0.3
FBXO28-201ENST00000366862 IQCB1Q15051 598 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 FAM47EQ6ZV65 393 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 APLFQ8IW19 511 aaPredicted RBP16.92■□□□□ 0.3
FBXO28-201ENST00000366862 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.92■□□□□ 0.3
FBXO28-201ENST00000366862 EMILIN3Q9NT22 766 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 PPARGC1AQ9UBK2 798 aaKnown RBP16.92■□□□□ 0.3
FBXO28-201ENST00000366862 TTC37Q6PGP7 1564 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 ATP1A1P05023 1023 aaKnown RBP16.92■□□□□ 0.3
FBXO28-201ENST00000366862 HNRNPH1P31943 449 aaKnown RBP16.92■□□□□ 0.3
FBXO28-201ENST00000366862 PCYT1AP49585 367 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 KPNA2P52292 529 aaKnown RBP16.92■□□□□ 0.3
FBXO28-201ENST00000366862 CUL3Q13618 768 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 CDC37Q16543 378 aaPredicted RBP16.92■□□□□ 0.3
FBXO28-201ENST00000366862 CCDC117Q8IWD4 279 aaPredicted RBP16.92■□□□□ 0.3
FBXO28-201ENST00000366862 PYROXD1Q8WU10 500 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 CCDC124Q96CT7 223 aaKnown RBP16.92■□□□□ 0.3
FBXO28-201ENST00000366862 HDAC11Q96DB2 347 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 MLXIPQ9HAP2 919 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 HDAC6Q9UBN7 1215 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 PLCG1P19174 1290 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 ODR4Q5SWX8 454 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 SPATA4Q8NEY3 305 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 ACSBG1Q96GR2 724 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 PCCAP05165 728 aaPredicted RBP16.92■□□□□ 0.3
FBXO28-201ENST00000366862 ADD2P35612 726 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 TEKT3Q9BXF9 490 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 USP40Q9NVE5 1235 aa16.92■□□□□ 0.3
FBXO28-201ENST00000366862 RTCBQ9Y3I0 505 aaKnown RBP16.92■□□□□ 0.3
FBXO28-201ENST00000366862 RIMBP2O15034 1052 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 KIFC3Q9BVG8 833 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 TNNC2P02585 160 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 HNRNPCP07910 306 aaKnown RBP eCLIP16.91■□□□□ 0.33e-7■■□□□ 12.8
FBXO28-201ENST00000366862 FSCBQ5H9T9 825 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 TEX2Q8IWB9 1127 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 PDIK1LQ8N165 341 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 TBC1D22AQ8WUA7 517 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 CCDC127Q96BQ5 260 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 GGA1Q9UJY5 639 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 TRIP13Q15645 432 aaPredicted RBP16.91■□□□□ 0.3
FBXO28-201ENST00000366862 IL17RAQ96F46 866 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 GNGT2O14610 69 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 DLATP10515 647 aaKnown RBP16.91■□□□□ 0.3
FBXO28-201ENST00000366862 KLC1Q07866 573 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 NYAP1Q6ZVC0 841 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 KRT26Q7Z3Y9 468 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 ZBTB38Q8NAP3 1195 aaPredicted RBP16.91■□□□□ 0.3
FBXO28-201ENST00000366862 ARL2BPQ9Y2Y0 163 aa16.91■□□□□ 0.3
FBXO28-201ENST00000366862 TEDDM1Q5T9Z0 273 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 CCNI2Q6ZMN8 369 aaPredicted RBP16.9■□□□□ 0.3
FBXO28-201ENST00000366862 RAPH1Q70E73 1250 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 PROM2Q8N271 834 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 MRPL40Q9NQ50 206 aaKnown RBP16.9■□□□□ 0.3
FBXO28-201ENST00000366862 WDR19Q8NEZ3 1342 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 KRT37O76014 449 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 BYSLQ13895 437 aaKnown RBP16.9■□□□□ 0.3
FBXO28-201ENST00000366862 RNF207Q6ZRF8 634 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 TFCP2L1Q9NZI6 479 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 TTLL3Q9Y4R7 772 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 PLEKHG3A1L390 1219 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 BRAFP15056 766 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 CHRNA3P32297 505 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 PIK3CAP42336 1068 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 CUL4BQ13620 913 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 DDB1Q16531 1140 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 PROCA1Q8NCQ7 364 aaPredicted RBP16.9■□□□□ 0.3
FBXO28-201ENST00000366862 APOBEC2Q9Y235 224 aaKnown RBP16.9■□□□□ 0.3
FBXO28-201ENST00000366862 NUB1Q9Y5A7 615 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 ABCA5Q8WWZ7 1642 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 LRRC53A6NM62 1247 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 DIAPH2O60879 1101 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 GABPAQ06546 454 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 DMP1Q13316 513 aaPredicted RBP16.9■□□□□ 0.3
FBXO28-201ENST00000366862 ZNF277Q9NRM2 450 aaPredicted RBP16.9■□□□□ 0.3
FBXO28-201ENST00000366862 ATG3Q9NT62 314 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 GDAQ9Y2T3 454 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 KCNQ3O43525 872 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 RAB44Q7Z6P3 723 aaPredicted RBP16.9■□□□□ 0.3
FBXO28-201ENST00000366862 NLRX1Q86UT6 975 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 ICA1LQ8NDH6 482 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 FBXL5Q9UKA1 691 aa16.9■□□□□ 0.3
FBXO28-201ENST00000366862 LRRN2O75325 713 aa16.89■□□□□ 0.29
FBXO28-201ENST00000366862 GOLGA8HP0CJ92 632 aa16.89■□□□□ 0.29
FBXO28-201ENST00000366862 HSPA9P38646 679 aaKnown RBP16.89■□□□□ 0.29
FBXO28-201ENST00000366862 IRAK1P51617 712 aa16.89■□□□□ 0.29
FBXO28-201ENST00000366862 BASP1P80723 227 aaKnown RBP16.89■□□□□ 0.29
FBXO28-201ENST00000366862 CRYMQ14894 314 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms