RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 INPP4AQ96PE3 977 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-209ENST00000366735 MAP3K14Q99558 947 aa14.28□□□□□ -0.12
MRPL55-209ENST00000366735 UBE2ZQ9H832 354 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-209ENST00000366735 KIAA1671Q9BY89 1806 aa14.27□□□□□ -0.12
MRPL55-209ENST00000366735 GNAQP50148 359 aa14.27□□□□□ -0.13
MRPL55-209ENST00000366735 HTRA4P83105 476 aaPredicted RBP14.27□□□□□ -0.13
MRPL55-209ENST00000366735 SP2Q02086 613 aa14.27□□□□□ -0.13
MRPL55-209ENST00000366735 TROAPQ12815 778 aa14.27□□□□□ -0.13
MRPL55-209ENST00000366735 MBTPS1Q14703 1052 aa14.27□□□□□ -0.13
MRPL55-209ENST00000366735 PUS10Q3MIT2 529 aaKnown RBP14.27□□□□□ -0.13
MRPL55-209ENST00000366735 CASC1Q6TDU7 716 aa14.27□□□□□ -0.13
MRPL55-209ENST00000366735 CYFIP1Q7L576 1253 aa14.27□□□□□ -0.13
MRPL55-209ENST00000366735 SPRED2Q7Z698 418 aa14.27□□□□□ -0.13
MRPL55-209ENST00000366735 SP7Q8TDD2 431 aaPredicted RBP14.27□□□□□ -0.13
MRPL55-209ENST00000366735 LZTS2Q9BRK4 669 aa14.27□□□□□ -0.13
MRPL55-209ENST00000366735 SPZ1Q9BXG8 430 aa14.27□□□□□ -0.13
MRPL55-209ENST00000366735 FAM50BQ9Y247 325 aa14.27□□□□□ -0.13
MRPL55-209ENST00000366735 NRCAMQ92823 1304 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 SPATA31C2B4DYI2 1134 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 E7EWF7 191 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 TREHO43280 583 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 CYTH3O43739 400 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 RPLP2P05387 115 aaKnown RBP14.26□□□□□ -0.13
MRPL55-209ENST00000366735 CTSHP09668 335 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 GSPT1P15170 499 aaKnown RBP14.26□□□□□ -0.13
MRPL55-209ENST00000366735 TCTN1Q2MV58 587 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 LEXMQ3ZCV2 418 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 TMEM31Q5JXX7 168 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 PCNX4Q63HM2 1172 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
MRPL55-209ENST00000366735 RSPH3Q86UC2 560 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 MRPL38Q96DV4 380 aaKnown RBP14.26□□□□□ -0.13
MRPL55-209ENST00000366735 GPR20Q99678 358 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 SENP7Q9BQF6 1050 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 C17orf80Q9BSJ5 609 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 MTA3Q9BTC8 594 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 MFRPQ9BY79 579 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 IL25Q9H293 177 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 RNPEPQ9H4A4 650 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 RWDD3Q9Y3V2 267 aa14.26□□□□□ -0.13
MRPL55-209ENST00000366735 ARIH1Q9Y4X5 557 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-209ENST00000366735 PIK3CDO00329 1044 aa14.25□□□□□ -0.13
MRPL55-209ENST00000366735 SMARCA1P28370 1054 aa14.25□□□□□ -0.13
MRPL55-209ENST00000366735 MRPS9P82933 396 aaKnown RBP14.25□□□□□ -0.13
MRPL55-209ENST00000366735 ARHGAP4P98171 946 aa14.25□□□□□ -0.13
MRPL55-209ENST00000366735 EPC2Q52LR7 807 aa14.25□□□□□ -0.13
MRPL55-209ENST00000366735 TAF2Q6P1X5 1199 aa14.25□□□□□ -0.13
MRPL55-209ENST00000366735 ZNF654Q8IZM8 581 aa14.25□□□□□ -0.13
MRPL55-209ENST00000366735 GPKOWQ92917 476 aaPredicted RBP eCLIP14.25□□□□□ -0.13
MRPL55-209ENST00000366735 TOP1MTQ969P6 601 aa14.25□□□□□ -0.13
MRPL55-209ENST00000366735 IFIH1Q9BYX4 1025 aaKnown RBP14.25□□□□□ -0.13
MRPL55-209ENST00000366735 EHMT1Q9H9B1 1298 aa14.25□□□□□ -0.13
MRPL55-209ENST00000366735 MYH9P35579 1960 aaKnown RBP14.25□□□□□ -0.13
MRPL55-209ENST00000366735 TTC3P53804 2025 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 UPP2O95045 317 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 CALM1P0DP23 149 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 CALM2P0DP24 149 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 CALM3P0DP25 149 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 KCNA5P22460 613 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 CHMLP26374 656 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 HIC1Q14526 733 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 UTP14CQ5TAP6 766 aaKnown RBP14.24□□□□□ -0.13
MRPL55-209ENST00000366735 NFXL1Q6ZNB6 911 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 TMTC2Q8N394 836 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 LMBR1Q8WVP7 490 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 PIBF1Q8WXW3 757 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 TNPO1Q92973 898 aaKnown RBP14.24□□□□□ -0.13
MRPL55-209ENST00000366735 GPRASP2Q96D09 838 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 RTEL1Q9NZ71 1219 aa14.24□□□□□ -0.13
MRPL55-209ENST00000366735 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-209ENST00000366735 CCDC69A6NI79 296 aa14.23□□□□□ -0.13
MRPL55-209ENST00000366735 H3BNC9 293 aa14.23□□□□□ -0.13
MRPL55-209ENST00000366735 SGSM2O43147 1006 aa14.23□□□□□ -0.13
MRPL55-209ENST00000366735 EIF5BO60841 1220 aaKnown RBP14.23□□□□□ -0.13
MRPL55-209ENST00000366735 SP4Q02446 784 aa14.23□□□□□ -0.13
MRPL55-209ENST00000366735 PTH1RQ03431 593 aa14.23□□□□□ -0.13
MRPL55-209ENST00000366735 GPM6BQ13491 265 aa14.23□□□□□ -0.13
MRPL55-209ENST00000366735 FAM26DQ5JW98 314 aa14.23□□□□□ -0.13
MRPL55-209ENST00000366735 PTCRAQ6ISU1 281 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-209ENST00000366735 MB21D2Q8IYB1 491 aaPredicted RBP14.23□□□□□ -0.13
MRPL55-209ENST00000366735 NSUN3Q9H649 340 aaKnown RBP14.23□□□□□ -0.13
MRPL55-209ENST00000366735 SETD4Q9NVD3 440 aa14.23□□□□□ -0.13
MRPL55-209ENST00000366735 ERAP1Q9NZ08 941 aa14.23□□□□□ -0.13
MRPL55-209ENST00000366735 RAPGEFL1Q9UHV5 662 aa14.23□□□□□ -0.13
MRPL55-209ENST00000366735 SPDYE3A6NKU9 549 aa14.22□□□□□ -0.13
MRPL55-209ENST00000366735 NCK2O43639 380 aa14.22□□□□□ -0.13
MRPL55-209ENST00000366735 GPR37L1O60883 481 aa14.22□□□□□ -0.13
MRPL55-209ENST00000366735 CDC45O75419 566 aa14.22□□□□□ -0.13
MRPL55-209ENST00000366735 SSTR3P32745 418 aaPredicted RBP14.22□□□□□ -0.13
MRPL55-209ENST00000366735 MCM5P33992 734 aa14.22□□□□□ -0.13
MRPL55-209ENST00000366735 TCF7P36402 384 aaPredicted RBP14.22□□□□□ -0.13
MRPL55-209ENST00000366735 PPFIA1Q13136 1202 aa14.22□□□□□ -0.13
MRPL55-209ENST00000366735 SEMA3FQ13275 785 aa14.22□□□□□ -0.13
MRPL55-209ENST00000366735 PDAP1Q13442 181 aaKnown RBP14.22□□□□□ -0.13
MRPL55-209ENST00000366735 SLC35G1Q2M3R5 365 aa14.22□□□□□ -0.13
MRPL55-209ENST00000366735 RPAINQ86UA6 219 aa14.22□□□□□ -0.13
MRPL55-209ENST00000366735 TRIM50Q86XT4 487 aa14.22□□□□□ -0.13
MRPL55-209ENST00000366735 TMEM192Q8IY95 271 aa14.22□□□□□ -0.13
MRPL55-209ENST00000366735 FIBCD1Q8N539 461 aa14.22□□□□□ -0.13
MRPL55-209ENST00000366735 BANK1Q8NDB2 785 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms