RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ZNRF3Q9ULT6 936 aa20.18■□□□□ 0.82
CLIP2-202ENST00000361545 LRRC4Q9HBW1 653 aa20.18■□□□□ 0.82
CLIP2-202ENST00000361545 MAD1L1Q9Y6D9 718 aa20.18■□□□□ 0.82
CLIP2-202ENST00000361545 RWDD2AQ9UIY3 292 aa20.18■□□□□ 0.82
CLIP2-202ENST00000361545 CEP152O94986 1710 aa20.18■□□□□ 0.82
CLIP2-202ENST00000361545 QRICH1Q2TAL8 776 aa20.18■□□□□ 0.82
CLIP2-202ENST00000361545 PTPN22Q9Y2R2 807 aa20.18■□□□□ 0.82
CLIP2-202ENST00000361545 HMGCS2P54868 508 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 CEP57Q86XR8 500 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 P3H4Q92791 437 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 ZBTB12Q9Y330 459 aaPredicted RBP20.17■□□□□ 0.82
CLIP2-202ENST00000361545 ENC1O14682 589 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 ABCD1P33897 745 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 PSMD2Q13200 908 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 ATG9AQ7Z3C6 839 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 ADGRF4Q8IZF3 695 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 PRPF38AQ8NAV1 312 aaKnown RBP20.17■□□□□ 0.82
CLIP2-202ENST00000361545 SLC38A10Q9HBR0 1119 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 TYW5A2RUC4 315 aaKnown RBP20.17■□□□□ 0.82
CLIP2-202ENST00000361545 CAMTA2O94983 1202 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 MB21D2Q8IYB1 491 aaPredicted RBP20.17■□□□□ 0.82
CLIP2-202ENST00000361545 UNC13BO14795 1591 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 IQCA1LA6NCM1 817 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 RGS16O15492 202 aaPredicted RBP20.17■□□□□ 0.82
CLIP2-202ENST00000361545 ZNF131P52739 623 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 ARHGAP4P98171 946 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 DSTYKQ6XUX3 929 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 SDCCAG8Q86SQ7 713 aaPredicted RBP20.17■□□□□ 0.82
CLIP2-202ENST00000361545 HEXIM2Q96MH2 286 aaKnown RBP20.17■□□□□ 0.82
CLIP2-202ENST00000361545 RRAGDQ9NQL2 400 aaPredicted RBP20.17■□□□□ 0.82
CLIP2-202ENST00000361545 CNOT7Q9UIV1 285 aaKnown RBP20.17■□□□□ 0.82
CLIP2-202ENST00000361545 OR6B2Q6IFH4 312 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 TDRD7Q8NHU6 1098 aaKnown RBP20.17■□□□□ 0.82
CLIP2-202ENST00000361545 MICAL1Q8TDZ2 1067 aa20.17■□□□□ 0.82
CLIP2-202ENST00000361545 IKBKBO14920 756 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 ATF2P15336 505 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 PRELPP51888 382 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 CRAMP1Q96RY5 1269 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 WDR64B1ANS9 1081 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 ETF1P62495 437 aaKnown RBP20.16■□□□□ 0.82
CLIP2-202ENST00000361545 GRM4Q14833 912 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 RYBPQ8N488 228 aaPredicted RBP20.16■□□□□ 0.82
CLIP2-202ENST00000361545 ZBED2Q9BTP6 218 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 PLCB1Q9NQ66 1216 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 INPP5FQ9Y2H2 1132 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 CDC27P30260 824 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 KSR1Q8IVT5 923 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 ZNF668Q96K58 619 aaPredicted RBP20.16■□□□□ 0.82
CLIP2-202ENST00000361545 LRRC7Q96NW7 1537 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 ZNF233A6NK53 670 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 CIB2O75838 187 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 PHBP35232 272 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 ERCC6LQ2NKX8 1250 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 CCNYQ8ND76 341 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 ATP6V0A4Q9HBG4 840 aa20.16■□□□□ 0.82
CLIP2-202ENST00000361545 TCP11Q8WWU5 503 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 ELP3Q9H9T3 547 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 CLTCQ00610 1675 aaKnown RBP20.15■□□□□ 0.82
CLIP2-202ENST00000361545 PPP2R5EQ16537 467 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 GAS2L3Q86XJ1 694 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 MMP19Q99542 508 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 QRICH2Q9H0J4 1663 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 E9PMD0 336 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 DNAJC24Q6P3W2 148 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 VSIG1Q86XK7 387 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 SIX6OS1Q8N1H7 587 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 NSUN4Q96CB9 384 aaKnown RBP20.15■□□□□ 0.82
CLIP2-202ENST00000361545 MXD3Q9BW11 206 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 RPAP3Q9H6T3 665 aaPredicted RBP20.15■□□□□ 0.82
CLIP2-202ENST00000361545 CCDC160A6NGH7 325 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 STAT3P40763 770 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 ITPK1Q13572 414 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 GKAP1Q5VSY0 366 aaPredicted RBP20.15■□□□□ 0.82
CLIP2-202ENST00000361545 STMN2Q93045 179 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 DYDC2Q96IM9 177 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 GDAQ9Y2T3 454 aa20.15■□□□□ 0.82
CLIP2-202ENST00000361545 SGK1O00141 431 aa20.14■□□□□ 0.82
CLIP2-202ENST00000361545 CUL4BQ13620 913 aa20.14■□□□□ 0.82
CLIP2-202ENST00000361545 PADI6Q6TGC4 694 aa20.14■□□□□ 0.82
CLIP2-202ENST00000361545 ZNF34Q8IZ26 560 aa20.14■□□□□ 0.82
CLIP2-202ENST00000361545 SKA2Q8WVK7 121 aaPredicted RBP20.14■□□□□ 0.82
CLIP2-202ENST00000361545 KIF9Q9HAQ2 790 aa20.14■□□□□ 0.82
CLIP2-202ENST00000361545 DAGLAQ9Y4D2 1042 aa20.14■□□□□ 0.82
CLIP2-202ENST00000361545 PNPLA6Q8IY17 1366 aa20.14■□□□□ 0.82
CLIP2-202ENST00000361545 MED7O43513 233 aa20.14■□□□□ 0.81
CLIP2-202ENST00000361545 CASP1P29466 404 aa20.14■□□□□ 0.81
CLIP2-202ENST00000361545 DYNLT1P63172 113 aa20.14■□□□□ 0.81
CLIP2-202ENST00000361545 CEP85LQ5SZL2 805 aa20.14■□□□□ 0.81
CLIP2-202ENST00000361545 TRIM11Q96F44 468 aa20.14■□□□□ 0.81
CLIP2-202ENST00000361545 CCDC68Q9H2F9 335 aa20.14■□□□□ 0.81
CLIP2-202ENST00000361545 TBC1D22BQ9NU19 505 aa20.14■□□□□ 0.81
CLIP2-202ENST00000361545 HERC5Q9UII4 1024 aaKnown RBP20.14■□□□□ 0.81
CLIP2-202ENST00000361545 BUB1BO60566 1050 aaPredicted RBP20.14■□□□□ 0.81
CLIP2-202ENST00000361545 FCER1AP12319 257 aa20.14■□□□□ 0.81
CLIP2-202ENST00000361545 SLFN12LQ6IEE8 588 aa20.14■□□□□ 0.81
CLIP2-202ENST00000361545 XPAP23025 273 aaPredicted RBP20.13■□□□□ 0.81
CLIP2-202ENST00000361545 TTLL4Q14679 1199 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 SWSAP1Q6NVH7 229 aa20.13■□□□□ 0.81
CLIP2-202ENST00000361545 GIMAP8Q8ND71 665 aaPredicted RBP20.13■□□□□ 0.81
CLIP2-202ENST00000361545 OR6B3Q8NGW1 331 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms