RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 LSP1P33241 339 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 DPYDQ12882 1025 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 TRIP13Q15645 432 aaPredicted RBP15.1■□□□□ 0.01
SMC5-201ENST00000361138 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.1■□□□□ 0.01
SMC5-201ENST00000361138 EXOC1LA0A1B0GW35 172 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 CTDNEP1O95476 244 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 CFBP00751 764 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 TRIM42Q8IWZ5 723 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 ST13P4Q8IZP2 240 aaPredicted RBP15.1■□□□□ 0.01
SMC5-201ENST00000361138 INTUQ9ULD6 942 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 CPDO75976 1380 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 hCG_1984214I3L0E3 225 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 SGK1O00141 431 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 CLIC2O15247 247 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 INHBAP08476 426 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 PLS3P13797 630 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 ZC3H18Q86VM9 953 aaKnown RBP15.1■□□□□ 0.01
SMC5-201ENST00000361138 ZNF713Q8N859 430 aaPredicted RBP15.1■□□□□ 0.01
SMC5-201ENST00000361138 TMEM60Q9H2L4 133 aa15.1■□□□□ 0.01
SMC5-201ENST00000361138 LRRN2O75325 713 aa15.09■□□□□ 0.01
SMC5-201ENST00000361138 PABPC4Q13310 644 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMC5-201ENST00000361138 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMC5-201ENST00000361138 DPP8Q6V1X1 898 aaPredicted RBP15.09■□□□□ 0.01
SMC5-201ENST00000361138 RNF207Q6ZRF8 634 aa15.09■□□□□ 0.01
SMC5-201ENST00000361138 PROM2Q8N271 834 aa15.09■□□□□ 0.01
SMC5-201ENST00000361138 PACSIN2Q9UNF0 486 aaPredicted RBP15.09■□□□□ 0.01
SMC5-201ENST00000361138 NPHP4O75161 1426 aaPredicted RBP15.09■□□□□ 0.01
SMC5-201ENST00000361138 NSFP46459 744 aaKnown RBP15.09■□□□□ 0.01
SMC5-201ENST00000361138 RBM26Q5T8P6 1007 aaKnown RBP15.09■□□□□ 0.01
SMC5-201ENST00000361138 NOC2LQ9Y3T9 749 aaKnown RBP15.09■□□□□ 0.01
SMC5-201ENST00000361138 HADHQ16836 314 aaKnown RBP15.09■□□□□ 0.01
SMC5-201ENST00000361138 MIER3Q7Z3K6 550 aa15.09■□□□□ 0.01
SMC5-201ENST00000361138 SH2D4AQ9H788 454 aa15.09■□□□□ 0.01
SMC5-201ENST00000361138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.09■□□□□ 0.015e-7■■■■□ 25.6
SMC5-201ENST00000361138 DKC1O60832 514 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMC5-201ENST00000361138 DYNC1I2Q13409 638 aaKnown RBP15.09■□□□□ 0.01
SMC5-201ENST00000361138 GEN1Q17RS7 908 aa15.09■□□□□ 0.01
SMC5-201ENST00000361138 FAM102BQ5T8I3 360 aa15.09■□□□□ 0.01
SMC5-201ENST00000361138 ZNF354CQ86Y25 554 aa15.09■□□□□ 0.01
SMC5-201ENST00000361138 SLC40A1Q9NP59 571 aa15.09■□□□□ 0.01
SMC5-201ENST00000361138 KIAA1210Q9ULL0 1709 aa15.08■□□□□ 0.01
SMC5-201ENST00000361138 CRCPO75575 148 aa15.08■□□□□ 0.01
SMC5-201ENST00000361138 GYPCP04921 128 aa15.08■□□□□ 0.01
SMC5-201ENST00000361138 BIRC2Q13490 618 aa15.08■□□□□ 0.01
SMC5-201ENST00000361138 PFKFB3Q16875 520 aaPredicted RBP15.08■□□□□ 0.01
SMC5-201ENST00000361138 TRIM11Q96F44 468 aa15.08■□□□□ 0.01
SMC5-201ENST00000361138 MS4A14Q96JA4 679 aa15.08■□□□□ 0.01
SMC5-201ENST00000361138 SYNGAP1Q96PV0 1343 aa15.08■□□□□ 0.01
SMC5-201ENST00000361138 CREB3O43889 395 aa15.08■□□□□ 0
SMC5-201ENST00000361138 THOC1Q96FV9 657 aaKnown RBP15.08■□□□□ 0
SMC5-201ENST00000361138 OSBPL1AQ9BXW6 950 aa15.08■□□□□ 0
SMC5-201ENST00000361138 SLITRK6Q9H5Y7 841 aa15.08■□□□□ 0
SMC5-201ENST00000361138 ALKQ9UM73 1620 aa15.08■□□□□ 0
SMC5-201ENST00000361138 H0Y3Z8 333 aa15.08■□□□□ 0
SMC5-201ENST00000361138 PLA2G4BP0C869 781 aa15.08■□□□□ 0
SMC5-201ENST00000361138 ESRRAP11474 423 aaPredicted RBP15.08■□□□□ 0
SMC5-201ENST00000361138 SEC16BQ96JE7 1060 aa15.08■□□□□ 0
SMC5-201ENST00000361138 DDX47Q9H0S4 455 aaKnown RBP15.08■□□□□ 0
SMC5-201ENST00000361138 BATF3Q9NR55 127 aa15.08■□□□□ 0
SMC5-201ENST00000361138 PDXDC1Q6P996 788 aa15.08■□□□□ 0
SMC5-201ENST00000361138 RSRC2Q7L4I2 434 aaKnown RBP15.08■□□□□ 0
SMC5-201ENST00000361138 ELOA2Q8IYF1 753 aaPredicted RBP15.08■□□□□ 0
SMC5-201ENST00000361138 TAB3Q8N5C8 712 aaPredicted RBP15.08■□□□□ 0
SMC5-201ENST00000361138 LRRN4CLQ8ND94 238 aa15.08■□□□□ 0
SMC5-201ENST00000361138 PIGSQ96S52 555 aa15.08■□□□□ 0
SMC5-201ENST00000361138 SSX2IPQ9Y2D8 614 aa15.08■□□□□ 0
SMC5-201ENST00000361138 SEMA3FQ13275 785 aa15.08■□□□□ 0
SMC5-201ENST00000361138 SPARCL1Q14515 664 aa15.08■□□□□ 0
SMC5-201ENST00000361138 RHOT2Q8IXI1 618 aa15.08■□□□□ 0
SMC5-201ENST00000361138 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.08■□□□□ 0
SMC5-201ENST00000361138 KCNB2Q92953 911 aa15.08■□□□□ 0
SMC5-201ENST00000361138 CCDC97Q96F63 343 aaPredicted RBP15.08■□□□□ 0
SMC5-201ENST00000361138 YWHAGP61981 247 aaKnown RBP eCLIP15.07■□□□□ 0
SMC5-201ENST00000361138 DBN1Q16643 649 aa15.07■□□□□ 0
SMC5-201ENST00000361138 WDR93Q6P2C0 686 aa15.07■□□□□ 0
SMC5-201ENST00000361138 TTC16Q8NEE8 873 aa15.07■□□□□ 0
SMC5-201ENST00000361138 ABTB1Q969K4 478 aaPredicted RBP15.07■□□□□ 0
SMC5-201ENST00000361138 IL17RAQ96F46 866 aa15.07■□□□□ 0
SMC5-201ENST00000361138 ZIM3Q96PE6 472 aa15.07■□□□□ 0
SMC5-201ENST00000361138 UBE2TQ9NPD8 197 aaPredicted RBP15.07■□□□□ 0
SMC5-201ENST00000361138 CYP2D7A0A087X1C5 515 aa15.07■□□□□ 0
SMC5-201ENST00000361138 LRRIQ3A6PVS8 624 aaPredicted RBP15.07■□□□□ 0
SMC5-201ENST00000361138 ATP2C1P98194 919 aaPredicted RBP15.07■□□□□ 0
SMC5-201ENST00000361138 CYP4A11Q02928 519 aa15.07■□□□□ 0
SMC5-201ENST00000361138 CYFIP2Q96F07 1278 aa15.07■□□□□ 0
SMC5-201ENST00000361138 PRMT1Q99873 361 aaKnown RBP15.07■□□□□ 0
SMC5-201ENST00000361138 A2ML1A8K2U0 1454 aa15.07■□□□□ 0
SMC5-201ENST00000361138 RASSF10A6NK89 507 aa15.07■□□□□ 0
SMC5-201ENST00000361138 ASPRV1Q53RT3 343 aa15.07■□□□□ 0
SMC5-201ENST00000361138 SGMS1Q86VZ5 419 aa15.07■□□□□ 0
SMC5-201ENST00000361138 TGS1Q96RS0 853 aaKnown RBP15.07■□□□□ 0
SMC5-201ENST00000361138 CD248Q9HCU0 757 aa15.07■□□□□ 0
SMC5-201ENST00000361138 ZFP69BQ9UJL9 534 aa15.07■□□□□ 0
SMC5-201ENST00000361138 MYO3AQ8NEV4 1616 aa15.07■□□□□ 0
SMC5-201ENST00000361138 PLCB4Q15147 1175 aa15.07■□□□□ 0
SMC5-201ENST00000361138 MMGT1Q8N4V1 131 aa15.07■□□□□ 0
SMC5-201ENST00000361138 TAF6LQ9Y6J9 622 aa15.07■□□□□ 0
SMC5-201ENST00000361138 CDC42BPGQ6DT37 1551 aa15.07■□□□□ 0
SMC5-201ENST00000361138 CDHR2Q9BYE9 1310 aa15.07■□□□□ 0
SMC5-201ENST00000361138 PABPN1LA6NDY0 278 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms