RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PHF20Q9BVI0 1012 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 PRR12Q9ULL5 1215 aa8.29□□□□□ -1.08
CLCN3-202ENST00000360642 PDS5AQ29RF7 1337 aaKnown RBP8.29□□□□□ -1.08
CLCN3-202ENST00000360642 SPINT1O43278 529 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 PRPF3O43395 683 aaKnown RBP8.28□□□□□ -1.08
CLCN3-202ENST00000360642 DNAJC6O75061 913 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 PDE4BQ07343 736 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 TROAPQ12815 778 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 DDR2Q16832 855 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 CTR9Q6PD62 1173 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 RIPOR1Q6ZS17 1223 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 SPATA20Q8TB22 786 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 IER2Q9BTL4 223 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 IRF2BPLQ9H1B7 796 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 TMX1Q9H3N1 280 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 PRKAG3Q9UGI9 489 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 MAN1B1Q9UKM7 699 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 TMEM238LA0A1B0GVL6 79 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 SFPQP23246 707 aaKnown RBP eCLIP8.28□□□□□ -1.08
CLCN3-202ENST00000360642 POSTNQ15063 836 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 OLFM4Q6UX06 510 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 CDAN1Q8IWY9 1227 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 NKD1Q969G9 470 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 NSUN4Q96CB9 384 aaKnown RBP8.28□□□□□ -1.08
CLCN3-202ENST00000360642 NOL10Q9BSC4 688 aaKnown RBP8.28□□□□□ -1.08
CLCN3-202ENST00000360642 RSRP1Q9BUV0 290 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 TRMT1Q9NXH9 659 aaKnown RBP8.28□□□□□ -1.08
CLCN3-202ENST00000360642 HOOK1Q9UJC3 728 aaKnown RBP8.28□□□□□ -1.08
CLCN3-202ENST00000360642 CEP131Q9UPN4 1083 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 CNTNAP4Q9C0A0 1308 aa8.28□□□□□ -1.08
CLCN3-202ENST00000360642 CYP2D7A0A087X1C5 515 aa8.27□□□□□ -1.08
CLCN3-202ENST00000360642 KIF2AO00139 706 aaPredicted RBP8.27□□□□□ -1.08
CLCN3-202ENST00000360642 KHNYNO15037 678 aaKnown RBP8.27□□□□□ -1.08
CLCN3-202ENST00000360642 POLR2DO15514 142 aaKnown RBP8.27□□□□□ -1.08
CLCN3-202ENST00000360642 CBFA2T2O43439 604 aa8.27□□□□□ -1.08
CLCN3-202ENST00000360642 GJB6O95452 261 aa8.27□□□□□ -1.08
CLCN3-202ENST00000360642 UBASH3AP57075 661 aa8.27□□□□□ -1.08
CLCN3-202ENST00000360642 MORC3Q14149 939 aa8.27□□□□□ -1.08
CLCN3-202ENST00000360642 DALRD3Q5D0E6 543 aaKnown RBP8.27□□□□□ -1.08
CLCN3-202ENST00000360642 IER5Q5VY09 327 aa8.27□□□□□ -1.08
CLCN3-202ENST00000360642 TBC1D9BQ66K14 1250 aa8.27□□□□□ -1.08
CLCN3-202ENST00000360642 VSTM4Q8IW00 320 aa8.27□□□□□ -1.08
CLCN3-202ENST00000360642 FRMD6Q96NE9 622 aa8.27□□□□□ -1.08
CLCN3-202ENST00000360642 MUC3BQ9H195 1237 aa8.27□□□□□ -1.08
CLCN3-202ENST00000360642 RBM28Q9NW13 759 aaKnown RBP8.27□□□□□ -1.08
CLCN3-202ENST00000360642 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.27□□□□□ -1.08
CLCN3-202ENST00000360642 MYH2Q9UKX2 1941 aa8.27□□□□□ -1.08
CLCN3-202ENST00000360642 BAZ2AQ9UIF9 1905 aaKnown RBP8.27□□□□□ -1.09
CLCN3-202ENST00000360642 GREM1O60565 184 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 CDKN1CP49918 316 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-202ENST00000360642 PLEKHG6Q3KR16 790 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 EARS2Q5JPH6 523 aaKnown RBP8.27□□□□□ -1.09
CLCN3-202ENST00000360642 IFIT1BQ5T764 474 aaKnown RBP8.27□□□□□ -1.09
CLCN3-202ENST00000360642 PDCL2Q8N4E4 241 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 TRIML1Q8N9V2 468 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 TNFRSF25Q93038 417 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 PPP1R13BQ96KQ4 1090 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 CSRNP2Q9H175 543 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 MYH6P13533 1939 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 ORC4O43929 436 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 PLEKHA8P1O95397 391 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 CALM1P0DP23 149 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 CALM2P0DP24 149 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 CALM3P0DP25 149 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 ZNF18P17022 549 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 CD33P20138 364 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 KLRK1P26718 216 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 NPY5RQ15761 445 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 FAM196AQ6ZSG2 479 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 CATIPQ7Z7H3 387 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 MLKLQ8NB16 471 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 INTS13Q9NVM9 706 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 DZANK1Q9NVP4 752 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 AATFQ9NY61 560 aaKnown RBP eCLIP8.27□□□□□ -1.09
CLCN3-202ENST00000360642 DDX56Q9NY93 547 aaKnown RBP8.27□□□□□ -1.09
CLCN3-202ENST00000360642 VPS54Q9P1Q0 977 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 CORINQ9Y5Q5 1042 aa8.27□□□□□ -1.09
CLCN3-202ENST00000360642 COL24A1Q17RW2 1714 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 LTBP4Q8N2S1 1624 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 IRS2Q9Y4H2 1338 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 CAPN5O15484 640 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-202ENST00000360642 SERPINC1P01008 464 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 EDN3P14138 238 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 XBP1P17861 261 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 KRT2P35908 639 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 RPS8P62241 208 aaKnown RBP8.26□□□□□ -1.09
CLCN3-202ENST00000360642 MECOMQ03112 1051 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 USP49Q70CQ1 688 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 LYSMD3Q7Z3D4 306 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 IQCA1Q86XH1 822 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 ENOX1Q8TC92 643 aaKnown RBP8.26□□□□□ -1.09
CLCN3-202ENST00000360642 MED15Q96RN5 788 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 SLC30A3Q99726 388 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 AKAP17AQ02040 695 aaKnown RBP8.26□□□□□ -1.09
CLCN3-202ENST00000360642 TBX2Q13207 712 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-202ENST00000360642 TMED8Q6PL24 325 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-202ENST00000360642 TMTC3Q6ZXV5 915 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 CCNJLQ8IV13 435 aa8.26□□□□□ -1.09
CLCN3-202ENST00000360642 KIF18AQ8NI77 898 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms