RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ACSL3O95573 720 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 ELF1P32519 619 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 ATP6V0A4Q9HBG4 840 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 MRGBPQ9NV56 204 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 DEAF1O75398 565 aaPredicted RBP14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 MOCS3O95396 460 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 TEX9Q8N6V9 391 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 NACC1Q96RE7 527 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 UHRF1BP1LA0JNW5 1464 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 PKP1Q13835 747 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 FAM47CQ5HY64 1035 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 LRRC59Q96AG4 307 aaKnown RBP14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 MTRQ99707 1265 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 KDM4CQ9H3R0 1056 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 PANK4Q9NVE7 773 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 HOXB7P09629 217 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 EIF2B5Q13144 721 aaKnown RBP14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 RHBDL2Q9NX52 303 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 GCFC2P16383 781 aaKnown RBP14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 KIF19Q2TAC6 998 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 ARMCX2Q7L311 632 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 RAB42Q8N4Z0 105 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 ASPSCR1Q9BZE9 553 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 GOLGA8IPA6NC78 632 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 UBAP1LF5GYI3 381 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 NBNO60934 754 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 CMA1P23946 247 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 ZC3H12BQ5HYM0 836 aaKnown RBP14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 GPBP1Q86WP2 473 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 ELMOD1Q8N336 334 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 DEPDC1BQ8WUY9 529 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 CFAP74Q9C0B2 1584 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 LRFN2Q9ULH4 789 aa14.18□□□□□ -0.14
SRGAP3-201ENST00000360413 DR1Q01658 176 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 FOXD4Q12950 439 aaPredicted RBP14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 C8orf37Q96NL8 207 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 NR1H4Q96RI1 486 aaPredicted RBP14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 MAGEB5Q9BZ81 275 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 SNX25Q9H3E2 840 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 GPBP1L1Q9HC44 474 aaPredicted RBP14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 KDM5BQ9UGL1 1544 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 NT5C2P49902 561 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 RARS2Q5T160 578 aaKnown RBP14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 PCGF5Q86SE9 256 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 MYLK4Q86YV6 388 aaPredicted RBP14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 ACRBPQ8NEB7 543 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 CNOT6LQ96LI5 555 aaKnown RBP14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 KIF17Q9P2E2 1029 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 SAP30BPQ9UHR5 308 aaKnown RBP14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 TNRQ92752 1358 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 ECM2O94769 699 aaPredicted RBP14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 ESRRBO95718 433 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 NDEL1Q9GZM8 345 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 MAP3K15Q6ZN16 1313 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 MYO1FO00160 1098 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 ARL4AP40617 200 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 TPH2Q8IWU9 490 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 MYL1P05976 194 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 CFAP36Q96G28 342 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 ARHGAP26Q9UNA1 814 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 FANCAO15360 1455 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 IQANK1A0A1B0GTG1 560 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 GNPATO15228 680 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 PDE8AO60658 829 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 RYBPQ8N488 228 aaPredicted RBP14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 SCG3Q8WXD2 468 aaKnown RBP14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 TUBGCP2Q9BSJ2 902 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 HNRNPRO43390 633 aaKnown RBP14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 RNF219Q5W0B1 726 aaPredicted RBP14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 RFX6Q8HWS3 928 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 SFMBT1Q9UHJ3 866 aa14.17□□□□□ -0.14
SRGAP3-201ENST00000360413 KLC1Q07866 573 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 CNGA3Q16281 694 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 FAM102BQ5T8I3 360 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 FRA10AC1Q70Z53 315 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 CATSPER3Q86XQ3 398 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 COG4Q9H9E3 785 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 ZSCAN32Q9NX65 697 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 EHD2Q9NZN4 543 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 MPP6Q9NZW5 540 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 PCDHA12Q9UN75 941 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 DLGAP5Q15398 846 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 EXOC3L4Q17RC7 722 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 DISC1Q9NRI5 854 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 RNF103-CHMP3A0A140T963 221 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 ALCAMQ13740 583 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 FSCBQ5H9T9 825 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 SPOPLQ6IQ16 392 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 APOBEC2Q9Y235 224 aaKnown RBP14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 GPAA1O43292 621 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 FOSP01100 380 aaPredicted RBP14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 MAP4P27816 1152 aaKnown RBP14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 SLFNL1Q499Z3 407 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 SRLQ86TD4 932 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 NOP9Q86U38 636 aaKnown RBP14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 ARHGEF1Q92888 912 aaKnown RBP14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 ADGBQ8N7X0 1667 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 MFAP3P55082 362 aa14.16□□□□□ -0.14
SRGAP3-201ENST00000360413 EPM2AIP1Q7L775 607 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 929.2 ms