RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ALKQ9UM73 1620 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 NOL3O60936 208 aaKnown RBP14.87□□□□□ -0.03
VCP-201ENST00000358901 CRCPO75575 148 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 BAG2O95816 211 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 SNAP25P60880 206 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 FMR1Q06787 632 aaKnown RBP eCLIP14.87□□□□□ -0.039e-7■■■■□ 19.5
VCP-201ENST00000358901 TRIM28Q13263 835 aaKnown RBP14.87□□□□□ -0.03
VCP-201ENST00000358901 TRIP13Q15645 432 aaPredicted RBP14.87□□□□□ -0.03
VCP-201ENST00000358901 CC2D2BQ6DHV5 1058 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 NFRKBQ6P4R8 1299 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 PIGOQ8TEQ8 1089 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 DNAJC17Q9NVM6 304 aaKnown RBP14.87□□□□□ -0.03
VCP-201ENST00000358901 GMNNO75496 209 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 FAM83BQ5T0W9 1011 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 CLEC4GQ6UXB4 293 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.87□□□□□ -0.03
VCP-201ENST00000358901 ANAPC5Q9UJX4 755 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 TULP4Q9NRJ4 1543 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 USP17L15C9J2P7 530 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 USP17L13C9JLJ4 530 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 USP17L11C9JVI0 530 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 USP17L18D6R9N7 530 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 USP17L22D6RA61 530 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 USP17L17D6RBQ6 530 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 USP17L19D6RCP7 530 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 USP17L20D6RJB6 530 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 E9PMD0 336 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 H7C0C1 242 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 SGK1O00141 431 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 ATP5OP48047 213 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 USP17L24Q0WX57 530 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 USP17L6PQ6QN14 398 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 PPP4R3CPQ6ZMV5 832 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 CEP170P1Q96L14 293 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 ZNF408Q9H9D4 720 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 KMT5AQ9NQR1 393 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 PI4KBQ9UBF8 816 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 CDHR2Q9BYE9 1310 aa14.87□□□□□ -0.03
VCP-201ENST00000358901 HMGB1P1B2RPK0 211 aaPredicted RBP14.86□□□□□ -0.03
VCP-201ENST00000358901 CCDC188H7C350 402 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 GCKP35557 465 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 SARNPP82979 210 aaKnown RBP14.86□□□□□ -0.03
VCP-201ENST00000358901 LMNB2Q03252 620 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 TAF12Q16514 161 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 FAM133BQ5BKY9 247 aaKnown RBP14.86□□□□□ -0.03
VCP-201ENST00000358901 ATP6V0A1Q93050 837 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 TMEM206Q9H813 350 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 SEPT9Q9UHD8 586 aaPredicted RBP14.86□□□□□ -0.03
VCP-201ENST00000358901 PLAAQ9Y263 795 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 PALLDQ8WX93 1383 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 SPATA31A3Q5VYP0 1347 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 PVALEFA0A1B0GWK0 134 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 NCK2O43639 380 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 VSNL1P62760 191 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 ATP2C1P98194 919 aaPredicted RBP14.86□□□□□ -0.03
VCP-201ENST00000358901 SYDE2Q5VT97 1194 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 CCDC125Q86Z20 511 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 CHP1Q99653 195 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 HESX1Q9UBX0 185 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 SNX24Q9Y343 169 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 ARAP3Q8WWN8 1544 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 GOLGA8SH3BPF8 625 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 GIPC1O14908 333 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 STAT2P52630 851 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 GRAPQ13588 217 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 GRAPLQ8TC17 118 aaPredicted RBP14.86□□□□□ -0.03
VCP-201ENST00000358901 ABCA6Q8N139 1617 aa14.86□□□□□ -0.03
VCP-201ENST00000358901 USP31Q70CQ4 1352 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 FRMD3A2A2Y4 597 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 FDPSP14324 419 aaKnown RBP14.85□□□□□ -0.03
VCP-201ENST00000358901 SLC12A2P55011 1212 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 KCNH2Q12809 1159 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 CUL1Q13616 776 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 BRDTQ58F21 947 aaPredicted RBP14.85□□□□□ -0.03
VCP-201ENST00000358901 SLC7A3Q8WY07 619 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 ZMYND12Q9H0C1 365 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 DHX36Q9H2U1 1008 aaKnown RBP14.85□□□□□ -0.03
VCP-201ENST00000358901 CEP72Q9P209 647 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 GOLGA8IPA6NC78 632 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 GOLGA8JA6NMD2 632 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 INHBAP08476 426 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 PPM1FP49593 454 aaPredicted RBP14.85□□□□□ -0.03
VCP-201ENST00000358901 CACNB3P54284 484 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 SLMAPQ14BN4 828 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 GLE1Q53GS7 698 aaKnown RBP14.85□□□□□ -0.03
VCP-201ENST00000358901 ARMC9Q7Z3E5 817 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 PPP4R1Q8TF05 950 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 CEP95Q96GE4 821 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 OSBPL9Q96SU4 736 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 CNOT10Q9H9A5 744 aaKnown RBP14.85□□□□□ -0.03
VCP-201ENST00000358901 EFCC1Q9HA90 598 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 TMEM260Q9NX78 707 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 NRKQ7Z2Y5 1582 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 ATP1A1P05023 1023 aaKnown RBP14.85□□□□□ -0.03
VCP-201ENST00000358901 GABPB2Q8TAK5 448 aaPredicted RBP14.85□□□□□ -0.03
VCP-201ENST00000358901 CNKSR1Q969H4 720 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 MYCBPQ99417 103 aaPredicted RBP14.85□□□□□ -0.03
VCP-201ENST00000358901 ACSL3O95573 720 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 USP14P54578 494 aa14.85□□□□□ -0.03
VCP-201ENST00000358901 TMED2Q15363 201 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms