RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 DOCK5Q9H7D0 1870 aa16.76■□□□□ 0.27
CCNE1-202ENST00000357943 A6NJR5 290 aa16.75■□□□□ 0.27
CCNE1-202ENST00000357943 NOP56O00567 594 aaKnown RBP16.75■□□□□ 0.27
CCNE1-202ENST00000357943 PPP6R2O75170 966 aa16.75■□□□□ 0.27
CCNE1-202ENST00000357943 FXR2P51116 673 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCNE1-202ENST00000357943 NCAPH2Q6IBW4 605 aa16.75■□□□□ 0.27
CCNE1-202ENST00000357943 ZNF746Q6NUN9 644 aaPredicted RBP16.75■□□□□ 0.27
CCNE1-202ENST00000357943 IGSF22Q8N9C0 903 aa16.75■□□□□ 0.27
CCNE1-202ENST00000357943 KCNG4Q8TDN1 519 aa16.75■□□□□ 0.27
CCNE1-202ENST00000357943 SPATA32Q96LK8 384 aa16.75■□□□□ 0.27
CCNE1-202ENST00000357943 UPF3AQ9H1J1 476 aaKnown RBP16.75■□□□□ 0.27
CCNE1-202ENST00000357943 SRPRBQ9Y5M8 271 aaKnown RBP16.75■□□□□ 0.27
CCNE1-202ENST00000357943 MORC2Q9Y6X9 1032 aaPredicted RBP16.75■□□□□ 0.27
CCNE1-202ENST00000357943 ELP1O95163 1332 aa16.75■□□□□ 0.27
CCNE1-202ENST00000357943 GSTTP1A0A1W2PQM5 241 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 MYCNP04198 464 aaPredicted RBP16.74■□□□□ 0.27
CCNE1-202ENST00000357943 MMP3P08254 477 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 FSCN1Q16658 493 aaKnown RBP16.74■□□□□ 0.27
CCNE1-202ENST00000357943 TMEM266Q2M3C6 531 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 ABHD15Q6UXT9 468 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 SMAP1Q8IYB5 467 aaPredicted RBP16.74■□□□□ 0.27
CCNE1-202ENST00000357943 SEPT1Q8WYJ6 367 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 CLIC6Q96NY7 704 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 SCAND2PQ9GZW5 306 aaPredicted RBP16.74■□□□□ 0.27
CCNE1-202ENST00000357943 SPC25Q9HBM1 224 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 DISC1Q9NRI5 854 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 TCEAL9Q9UHQ7 104 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 SAMM50Q9Y512 469 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 PP2D1A8MPX8 630 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 WDR64B1ANS9 1081 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 ATG7O95352 703 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 GJB1P08034 283 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 CDC25AP30304 524 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 TCF7P36402 384 aaPredicted RBP16.74■□□□□ 0.27
CCNE1-202ENST00000357943 CPT1AP50416 773 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 NKX3-2P78367 333 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 GNASQ5JWF2 1037 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 MIER3Q7Z3K6 550 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 KRI1Q8N9T8 703 aaKnown RBP16.74■□□□□ 0.27
CCNE1-202ENST00000357943 KLHDC9Q8NEP7 349 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 U2AF1L4Q8WU68 220 aaKnown RBP16.74■□□□□ 0.27
CCNE1-202ENST00000357943 FERMT2Q96AC1 680 aa16.74■□□□□ 0.27
CCNE1-202ENST00000357943 SFNP31947 248 aa16.73■□□□□ 0.27
CCNE1-202ENST00000357943 PDIA5Q14554 519 aa16.73■□□□□ 0.27
CCNE1-202ENST00000357943 LRRC41Q15345 812 aa16.73■□□□□ 0.27
CCNE1-202ENST00000357943 SPECC1Q5M775 1068 aa16.73■□□□□ 0.27
CCNE1-202ENST00000357943 CSRNP2Q9H175 543 aa16.73■□□□□ 0.27
CCNE1-202ENST00000357943 LRWD1Q9UFC0 647 aa16.73■□□□□ 0.27
CCNE1-202ENST00000357943 PCDHA7Q9UN72 937 aa16.73■□□□□ 0.27
CCNE1-202ENST00000357943 PCDHA10Q9Y5I2 948 aa16.73■□□□□ 0.27
CCNE1-202ENST00000357943 PPFIA4O75335 1185 aa16.72■□□□□ 0.27
CCNE1-202ENST00000357943 SGPL1O95470 568 aa16.72■□□□□ 0.27
CCNE1-202ENST00000357943 SUPT20HL2P0C7V6 817 aa16.72■□□□□ 0.27
CCNE1-202ENST00000357943 HOXD8P13378 290 aaPredicted RBP16.72■□□□□ 0.27
CCNE1-202ENST00000357943 ME1P48163 572 aa16.72■□□□□ 0.27
CCNE1-202ENST00000357943 JAK3P52333 1124 aa16.72■□□□□ 0.27
CCNE1-202ENST00000357943 DGKDQ16760 1214 aa16.72■□□□□ 0.27
CCNE1-202ENST00000357943 AXDND1Q5T1B0 1012 aaPredicted RBP16.72■□□□□ 0.27
CCNE1-202ENST00000357943 CCSAPQ6IQ19 270 aaPredicted RBP16.72■□□□□ 0.27
CCNE1-202ENST00000357943 RNF180Q86T96 592 aa16.72■□□□□ 0.27
CCNE1-202ENST00000357943 TRIM50Q86XT4 487 aa16.72■□□□□ 0.27
CCNE1-202ENST00000357943 CCDC60Q8IWA6 550 aaPredicted RBP16.72■□□□□ 0.27
CCNE1-202ENST00000357943 PCYT2Q99447 389 aa16.72■□□□□ 0.27
CCNE1-202ENST00000357943 RAB34Q9BZG1 259 aa16.72■□□□□ 0.27
CCNE1-202ENST00000357943 OGDHLQ9ULD0 1010 aa16.72■□□□□ 0.27
CCNE1-202ENST00000357943 TCHHQ07283 1943 aa16.72■□□□□ 0.27
CCNE1-202ENST00000357943 IGKV6D-21A0A0A0MT36 114 aa16.71■□□□□ 0.27
CCNE1-202ENST00000357943 ZNF286BP0CG31 522 aa16.71■□□□□ 0.27
CCNE1-202ENST00000357943 CST5P28325 142 aaPredicted RBP16.71■□□□□ 0.27
CCNE1-202ENST00000357943 LONP1P36776 959 aaKnown RBP16.71■□□□□ 0.27
CCNE1-202ENST00000357943 GJA8P48165 433 aa16.71■□□□□ 0.27
CCNE1-202ENST00000357943 EPHA7Q15375 998 aa16.71■□□□□ 0.27
CCNE1-202ENST00000357943 KCNA10Q16322 511 aa16.71■□□□□ 0.27
CCNE1-202ENST00000357943 BRDTQ58F21 947 aaPredicted RBP16.71■□□□□ 0.27
CCNE1-202ENST00000357943 UTP14CQ5TAP6 766 aaKnown RBP16.71■□□□□ 0.27
CCNE1-202ENST00000357943 SWSAP1Q6NVH7 229 aa16.71■□□□□ 0.27
CCNE1-202ENST00000357943 MIS18BP1Q6P0N0 1132 aa16.71■□□□□ 0.27
CCNE1-202ENST00000357943 EIF2AK1Q9BQI3 630 aaKnown RBP16.71■□□□□ 0.27
CCNE1-202ENST00000357943 CRISPLD2Q9H0B8 497 aa16.71■□□□□ 0.27
CCNE1-202ENST00000357943 RGL1Q9NZL6 768 aa16.71■□□□□ 0.27
CCNE1-202ENST00000357943 LGALS2P05162 132 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 ASGR1P07306 291 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 PSAPP07602 524 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 MYL3P08590 195 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 CYP4A11Q02928 519 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 CLEC17AQ6ZS10 378 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 USP49Q70CQ1 688 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 BANK1Q8NDB2 785 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 RDM1Q8NG50 284 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 DYDC2Q96IM9 177 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 EPSTI1Q96J88 318 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 AK8Q96MA6 479 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 C16orf70Q9BSU1 422 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 TMEM106CQ9BVX2 250 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 GABBR1Q9UBS5 961 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 BACH1O14867 736 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 LGR5O75473 907 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 SLITRK3O94933 977 aa16.7■□□□□ 0.26
CCNE1-202ENST00000357943 TFRCP02786 760 aaKnown RBP16.7■□□□□ 0.26
CCNE1-202ENST00000357943 PURAQ00577 322 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms