RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 SNED1Q8TER0 1413 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 M0R2N6 131 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 FAM153BP0C7A2 387 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 KIF5BP33176 963 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 KLK7P49862 253 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 LRRC63Q05C16 580 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 RIPK1Q13546 671 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 FAM153CQ494X1 144 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 MEI1Q5TIA1 1274 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 CACNA2D3Q8IZS8 1091 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 CCHCR1Q8TD31 782 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 N4BP2L2Q92802 583 aaPredicted RBP11.71□□□□□ -0.54
CAPN3-205ENST00000357568 TRIM9Q9C026 710 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 RABEP2Q9H5N1 569 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 BATF3Q9NR55 127 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 DDX20Q9UHI6 824 aaKnown RBP11.71□□□□□ -0.54
CAPN3-205ENST00000357568 FAM153AQ9UHL3 310 aa11.71□□□□□ -0.54
CAPN3-205ENST00000357568 PPP1R12AO14974 1030 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-205ENST00000357568 MATR3P43243 847 aaKnown RBP eCLIP11.7□□□□□ -0.54
CAPN3-205ENST00000357568 C10orf76Q5T2E6 689 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 RCSD1Q6JBY9 416 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 RTKN2Q8IZC4 609 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 SRBD1Q8N5C6 995 aaKnown RBP11.7□□□□□ -0.54
CAPN3-205ENST00000357568 MAB21L3Q8N8X9 362 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 TATDN2Q93075 761 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 HOOK2Q96ED9 719 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 PBKQ96KB5 322 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 FLT1P17948 1338 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 PVALEFA0A1B0GWK0 134 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 CCDC189A1A4V9 331 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 SERPING1P05155 500 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 PLEKP08567 350 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-205ENST00000357568 PPP2R2AP63151 447 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 USP38Q8NB14 1042 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 MTMR8Q96EF0 704 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.7□□□□□ -0.54
CAPN3-205ENST00000357568 MYH1P12882 1939 aa11.7□□□□□ -0.54
CAPN3-205ENST00000357568 LAMB1P07942 1786 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 PDE4DQ08499 809 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 SLC9C1Q4G0N8 1177 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 SEC16BQ96JE7 1060 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 OSBPL7Q9BZF2 842 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 VPS33BQ9H267 617 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 CEP72Q9P209 647 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 MINPP1Q9UNW1 487 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 LRRC53A6NM62 1247 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 CCDC188H7C350 402 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 ANXA13P27216 316 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 SCTRP47872 440 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 SEC24CP53992 1094 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 EIF3BP55884 814 aaKnown RBP11.69□□□□□ -0.54
CAPN3-205ENST00000357568 LMNB2Q03252 620 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 GKAP1Q5VSY0 366 aaPredicted RBP11.69□□□□□ -0.54
CAPN3-205ENST00000357568 HGSNATQ68CP4 663 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 MAATS1Q7Z4T9 603 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 GUF1Q8N442 669 aaKnown RBP11.69□□□□□ -0.54
CAPN3-205ENST00000357568 SUPT20HQ8NEM7 779 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 ACTRT1Q8TDG2 376 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 TPX2Q9ULW0 747 aaKnown RBP11.69□□□□□ -0.54
CAPN3-205ENST00000357568 BCS1LQ9Y276 419 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 LTBP3Q9NS15 1303 aa11.69□□□□□ -0.54
CAPN3-205ENST00000357568 MAGEB6P1A0A0J9YX57 407 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 ATP2B4P23634 1241 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 HSD17B3P37058 310 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 GNAQP50148 359 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 IRX1P78414 480 aaPredicted RBP11.68□□□□□ -0.54
CAPN3-205ENST00000357568 IFI16Q16666 785 aaKnown RBP11.68□□□□□ -0.54
CAPN3-205ENST00000357568 SCFD2Q8WU76 684 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 IFT81Q8WYA0 676 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 SEC14L1Q92503 715 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 RTFDC1Q9BY42 306 aaPredicted RBP11.68□□□□□ -0.54
CAPN3-205ENST00000357568 TCP11L1Q9NUJ3 509 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 SALL4Q9UJQ4 1053 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 LEMD3Q9Y2U8 911 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 COL1A1P02452 1464 aaPredicted RBP11.68□□□□□ -0.54
CAPN3-205ENST00000357568 CFAP73A6NFT4 308 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 ECHS1P30084 290 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 CHRNDQ07001 517 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 ITIH4Q14624 930 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 FAM228AQ86W67 206 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 RASSF8Q8NHQ8 419 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 CCT6BQ92526 530 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 PSMD1Q99460 953 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 RIOK1Q9BRS2 568 aaKnown RBP11.68□□□□□ -0.54
CAPN3-205ENST00000357568 RIC8AQ9NPQ8 531 aa11.68□□□□□ -0.54
CAPN3-205ENST00000357568 ATAD5Q96QE3 1844 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 CCDC194A0A1B0GVG4 234 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 NCK2O43639 380 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 RTN2O75298 545 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 CXCR5P32302 372 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 ZNF844Q08AG5 666 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 PSMD2Q13200 908 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 RRAGAQ7L523 313 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 CABP7Q86V35 215 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 ANKS1AQ92625 1134 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 KRT12Q99456 494 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 MOV10L1Q9BXT6 1211 aaKnown RBP11.67□□□□□ -0.54
CAPN3-205ENST00000357568 SLITRK6Q9H5Y7 841 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 STK17AQ9UEE5 414 aa11.67□□□□□ -0.54
CAPN3-205ENST00000357568 DNM1LO00429 736 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms