RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 SCYL3Q8IZE3 742 aa19.57■□□□□ 0.72
NPAS3-202ENST00000356141 MB21D1Q8N884 522 aa19.57■□□□□ 0.72
NPAS3-202ENST00000356141 ZNF280CQ8ND82 737 aa19.57■□□□□ 0.72
NPAS3-202ENST00000356141 NT5C3AQ9H0P0 336 aa19.57■□□□□ 0.72
NPAS3-202ENST00000356141 SPON1Q9HCB6 807 aa19.57■□□□□ 0.72
NPAS3-202ENST00000356141 COL2A1P02458 1487 aaPredicted RBP19.56■□□□□ 0.72
NPAS3-202ENST00000356141 EPHB6O15197 1021 aa19.56■□□□□ 0.72
NPAS3-202ENST00000356141 WDR46O15213 610 aaKnown RBP19.56■□□□□ 0.72
NPAS3-202ENST00000356141 LMNB1P20700 586 aa19.56■□□□□ 0.72
NPAS3-202ENST00000356141 PBX1P40424 430 aa19.56■□□□□ 0.72
NPAS3-202ENST00000356141 BACE1P56817 501 aa19.56■□□□□ 0.72
NPAS3-202ENST00000356141 BAATQ14032 418 aaPredicted RBP19.56■□□□□ 0.72
NPAS3-202ENST00000356141 UTP14CQ5TAP6 766 aaKnown RBP19.56■□□□□ 0.72
NPAS3-202ENST00000356141 MYOCDQ8IZQ8 938 aa19.56■□□□□ 0.72
NPAS3-202ENST00000356141 DHTKD1Q96HY7 919 aaPredicted RBP19.56■□□□□ 0.72
NPAS3-202ENST00000356141 KIAA1683Q9H0B3 1180 aa19.56■□□□□ 0.72
NPAS3-202ENST00000356141 MMRN2Q9H8L6 949 aa19.56■□□□□ 0.72
NPAS3-202ENST00000356141 KCNH7Q9NS40 1196 aa19.56■□□□□ 0.72
NPAS3-202ENST00000356141 ORC2Q13416 577 aaPredicted RBP19.56■□□□□ 0.72
NPAS3-202ENST00000356141 ERMNQ8TAM6 284 aa19.56■□□□□ 0.72
NPAS3-202ENST00000356141 RABGAP1Q9Y3P9 1069 aa19.56■□□□□ 0.72
NPAS3-202ENST00000356141 BRCA1P38398 1863 aaKnown RBP19.56■□□□□ 0.72
NPAS3-202ENST00000356141 ATP9AO75110 1047 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 SLITRK3O94933 977 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 NMT1P30419 496 aaKnown RBP19.55■□□□□ 0.72
NPAS3-202ENST00000356141 ERVK-24P63145 666 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 EAPPQ56P03 285 aaPredicted RBP19.55■□□□□ 0.72
NPAS3-202ENST00000356141 NYAP1Q6ZVC0 841 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 ZBTB9Q96C00 473 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 CLMNQ96JQ2 1002 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 MAP7D2Q96T17 732 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 RNF216Q9NWF9 866 aaPredicted RBP19.55■□□□□ 0.72
NPAS3-202ENST00000356141 TRIM10Q9UDY6 481 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 PPP1R9AQ9ULJ8 1098 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 KDM3AQ9Y4C1 1321 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 MMP14P50281 582 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 MRPS9P82933 396 aaKnown RBP19.55■□□□□ 0.72
NPAS3-202ENST00000356141 MKRN3Q13064 507 aaKnown RBP19.55■□□□□ 0.72
NPAS3-202ENST00000356141 CCDC112Q8NEF3 446 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 MYRIPQ8NFW9 859 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 SYTL5Q8TDW5 730 aaPredicted RBP19.55■□□□□ 0.72
NPAS3-202ENST00000356141 RMDN3Q96TC7 470 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 R3HDMLQ9H3Y0 253 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 MAGEF1Q9HAY2 307 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 SLC38A10Q9HBR0 1119 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 RNF146Q9NTX7 359 aa19.55■□□□□ 0.72
NPAS3-202ENST00000356141 VWA5AO00534 786 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 GCNT3O95395 438 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 TFRCP02786 760 aaKnown RBP19.54■□□□□ 0.72
NPAS3-202ENST00000356141 GIT2Q14161 759 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 CCDC40Q4G0X9 1142 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 REXO1L1PQ8IX06 675 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 SCFD1Q8WVM8 642 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 MBOAT7Q96N66 472 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 ZNF408Q9H9D4 720 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 PIK3CDO00329 1044 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 MYL1P05976 194 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 RPA1P27694 616 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 MAP3K10Q02779 954 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 TREML2Q5T2D2 321 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 DCAF15Q66K64 600 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 CCDC65Q8IXS2 484 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 WDR24Q96S15 920 aa19.54■□□□□ 0.72
NPAS3-202ENST00000356141 BICDL2A1A5D9 508 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 LGALS16A8MUM7 142 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 GNG11P61952 73 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 RNF207Q6ZRF8 634 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 LXNQ9BS40 222 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 THAP9Q9H5L6 903 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 ELP3Q9H9T3 547 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.53■□□□□ 0.72
NPAS3-202ENST00000356141 ABHD10Q9NUJ1 306 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 ARHGAP6O43182 974 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 PSMD10O75832 226 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 SPAG1Q07617 926 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 ITGB3BPQ13352 177 aaPredicted RBP19.53■□□□□ 0.72
NPAS3-202ENST00000356141 MIIPQ5JXC2 388 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 C9orf131Q5VYM1 1079 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 FAM43BQ6ZT52 329 aaPredicted RBP19.53■□□□□ 0.72
NPAS3-202ENST00000356141 MYCT1Q8N699 235 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 KLRG1Q96E93 195 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 OTUD5Q96G74 571 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 FAM20AQ96MK3 541 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 SYT17Q9BSW7 474 aa19.53■□□□□ 0.72
NPAS3-202ENST00000356141 ZBED4O75132 1171 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 PLEKP08567 350 aaPredicted RBP19.52■□□□□ 0.72
NPAS3-202ENST00000356141 TPM1P09493 284 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 VGLL4Q14135 290 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 COG2Q14746 738 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 ARHGEF16Q5VV41 709 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 CENPPQ6IPU0 288 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 PAGR1Q9BTK6 254 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 NLRC4Q9NPP4 1024 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 ATAD5Q96QE3 1844 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 CIITAP33076 1130 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 ARID5AQ03989 594 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 FSTL1Q12841 308 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 EEPD1Q7L9B9 569 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 GPC2Q8N158 579 aa19.52■□□□□ 0.72
NPAS3-202ENST00000356141 NAP1L4Q99733 375 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms