RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 FBXO11Q86XK2 927 aa15.35■□□□□ 0.05
SREBF1-202ENST00000355815 LARGE2Q8N3Y3 721 aa15.35■□□□□ 0.05
SREBF1-202ENST00000355815 KCNV2Q8TDN2 545 aa15.35■□□□□ 0.05
SREBF1-202ENST00000355815 U2AF1L4Q8WU68 220 aaKnown RBP15.35■□□□□ 0.05
SREBF1-202ENST00000355815 PACSIN2Q9UNF0 486 aaPredicted RBP15.35■□□□□ 0.05
SREBF1-202ENST00000355815 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
SREBF1-202ENST00000355815 H0Y3Z8 333 aa15.35■□□□□ 0.05
SREBF1-202ENST00000355815 HAUS3Q68CZ6 603 aa15.35■□□□□ 0.05
SREBF1-202ENST00000355815 RIC1Q4ADV7 1423 aa15.35■□□□□ 0.05
SREBF1-202ENST00000355815 LRRD1A4D1F6 860 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 LGALS16A8MUM7 142 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 BBOX1O75936 387 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 EPB41P11171 864 aaKnown RBP15.34■□□□□ 0.05
SREBF1-202ENST00000355815 PRPF38AQ8NAV1 312 aaKnown RBP15.34■□□□□ 0.05
SREBF1-202ENST00000355815 CSRNP1Q96S65 589 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 INTS13Q9NVM9 706 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 ATP1A1P05023 1023 aaKnown RBP15.34■□□□□ 0.05
SREBF1-202ENST00000355815 TAL1P17542 331 aaPredicted RBP15.34■□□□□ 0.05
SREBF1-202ENST00000355815 PMS1P54277 932 aaKnown RBP15.34■□□□□ 0.05
SREBF1-202ENST00000355815 PROCA1Q8NCQ7 364 aaPredicted RBP15.34■□□□□ 0.05
SREBF1-202ENST00000355815 SPDL1Q96EA4 605 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 TRIM9Q9C026 710 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 INTS9Q9NV88 658 aaKnown RBP15.34■□□□□ 0.05
SREBF1-202ENST00000355815 MTUS1Q9ULD2 1270 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 GALNT17Q6IS24 598 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 CCDC197Q8NCU1 140 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 BHMT2Q9H2M3 363 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 IL17RBQ9NRM6 502 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 POTEFA5A3E0 1075 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 POTEIP0CG38 1075 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 KCTD19Q17RG1 926 aaPredicted RBP15.34■□□□□ 0.05
SREBF1-202ENST00000355815 ABCB5Q2M3G0 1257 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 POTEGQ6S5H5 508 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 POTEEQ6S8J3 1075 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 TRIM4Q9C037 500 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 CTTNBP2NLQ9P2B4 639 aa15.34■□□□□ 0.05
SREBF1-202ENST00000355815 PLEKP08567 350 aaPredicted RBP15.33■□□□□ 0.05
SREBF1-202ENST00000355815 XRCC5P13010 732 aaKnown RBP15.33■□□□□ 0.05
SREBF1-202ENST00000355815 ZBED6P86452 979 aa15.33■□□□□ 0.05
SREBF1-202ENST00000355815 GFPT1Q06210 699 aaPredicted RBP15.33■□□□□ 0.05
SREBF1-202ENST00000355815 NOA1Q8NC60 698 aaKnown RBP15.33■□□□□ 0.05
SREBF1-202ENST00000355815 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.33■□□□□ 0.05
SREBF1-202ENST00000355815 KLHL14Q9P2G3 628 aa15.33■□□□□ 0.05
SREBF1-202ENST00000355815 BCL9O00512 1426 aa15.33■□□□□ 0.04
SREBF1-202ENST00000355815 RPL13P26373 211 aaKnown RBP15.33■□□□□ 0.04
SREBF1-202ENST00000355815 KIF11P52732 1056 aa15.33■□□□□ 0.04
SREBF1-202ENST00000355815 EPHB4P54760 987 aa15.33■□□□□ 0.04
SREBF1-202ENST00000355815 FKBP3Q00688 224 aaKnown RBP15.33■□□□□ 0.04
SREBF1-202ENST00000355815 CTTNQ14247 550 aaKnown RBP15.33■□□□□ 0.04
SREBF1-202ENST00000355815 ADGRF4Q8IZF3 695 aa15.33■□□□□ 0.04
SREBF1-202ENST00000355815 ARHGEF35A5YM69 484 aa15.33■□□□□ 0.04
SREBF1-202ENST00000355815 GAS7O60861 476 aa15.33■□□□□ 0.04
SREBF1-202ENST00000355815 GH2P01242 217 aa15.33■□□□□ 0.04
SREBF1-202ENST00000355815 PLA2G4BP0C869 781 aa15.33■□□□□ 0.04
SREBF1-202ENST00000355815 TAF11Q15544 211 aa15.33■□□□□ 0.04
SREBF1-202ENST00000355815 TAB3Q8N5C8 712 aaPredicted RBP15.33■□□□□ 0.04
SREBF1-202ENST00000355815 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.04
SREBF1-202ENST00000355815 NAP1L3Q99457 506 aaPredicted RBP15.33■□□□□ 0.04
SREBF1-202ENST00000355815 EMILIN3Q9NT22 766 aa15.33■□□□□ 0.04
SREBF1-202ENST00000355815 MYO1AQ9UBC5 1043 aa15.33■□□□□ 0.04
SREBF1-202ENST00000355815 LRRC53A6NM62 1247 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 LRRN2O75325 713 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 ABL1P00519 1130 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 GUCY1A3Q02108 690 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 SEL1L2Q5TEA6 688 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 CCDC127Q96BQ5 260 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 LCMT1Q9UIC8 334 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 GJA3Q9Y6H8 435 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 OPHN1O60890 802 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 STAMBPO95630 424 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 HSPA1LP34931 641 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 RFC1P35251 1148 aaPredicted RBP15.32■□□□□ 0.04
SREBF1-202ENST00000355815 ADSSL1Q8N142 457 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 NEDD1Q8NHV4 660 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 PSMD1Q99460 953 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 PCIF1Q9H4Z3 704 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 DAGLAQ9Y4D2 1042 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 FLT1P17948 1338 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 TNFAIP3P21580 790 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 CDC37Q16543 378 aaPredicted RBP15.32■□□□□ 0.04
SREBF1-202ENST00000355815 ASPRV1Q53RT3 343 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 AK8Q96MA6 479 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 TCHPQ9BT92 498 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 NT5C3AQ9H0P0 336 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 FRMD4BQ9Y2L6 1034 aa15.32■□□□□ 0.04
SREBF1-202ENST00000355815 STXBP3O00186 592 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 PDHA1P08559 390 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 ALAS1P13196 640 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 ERVK-24P63145 666 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 MAN2A1Q16706 1144 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 HHATQ5VTY9 493 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 TAOK1Q7L7X3 1001 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 TBC1D16Q8TBP0 767 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 MLXIPLQ9NP71 852 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 MYO1FO00160 1098 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 ATP2A1O14983 1001 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 PFDN1O60925 122 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 PRPHP41219 470 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 VWA3BQ502W6 1294 aa15.31■□□□□ 0.04
SREBF1-202ENST00000355815 NFRKBQ6P4R8 1299 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms