RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 GUF1Q8N442 669 aaKnown RBP25.44■■□□□ 1.66
SCAMP3-202ENST00000355379 SPATC1LQ9H0A9 340 aa25.44■■□□□ 1.66
SCAMP3-202ENST00000355379 LIMA1Q9UHB6 759 aaKnown RBP25.44■■□□□ 1.66
SCAMP3-202ENST00000355379 KIAA1217Q5T5P2 1943 aa25.44■■□□□ 1.66
SCAMP3-202ENST00000355379 PFASO15067 1338 aa25.44■■□□□ 1.66
SCAMP3-202ENST00000355379 A0A1B0GTH6 734 aa25.43■■□□□ 1.66
SCAMP3-202ENST00000355379 CHMP2AO43633 222 aa25.43■■□□□ 1.66
SCAMP3-202ENST00000355379 COPB2P35606 906 aa25.43■■□□□ 1.66
SCAMP3-202ENST00000355379 COASYQ13057 564 aa25.43■■□□□ 1.66
SCAMP3-202ENST00000355379 SNAPC2Q13487 334 aa25.43■■□□□ 1.66
SCAMP3-202ENST00000355379 DNERQ8NFT8 737 aa25.43■■□□□ 1.66
SCAMP3-202ENST00000355379 ZNF830Q96NB3 372 aaPredicted RBP25.43■■□□□ 1.66
SCAMP3-202ENST00000355379 PURBQ96QR8 312 aaKnown RBP25.43■■□□□ 1.66
SCAMP3-202ENST00000355379 IWS1Q96ST2 819 aa25.43■■□□□ 1.66
SCAMP3-202ENST00000355379 KCNF1Q9H3M0 494 aa25.43■■□□□ 1.66
SCAMP3-202ENST00000355379 THAP9Q9H5L6 903 aa25.43■■□□□ 1.66
SCAMP3-202ENST00000355379 SLC39A2Q9NP94 309 aa25.43■■□□□ 1.66
SCAMP3-202ENST00000355379 LRRC10BA6NIK2 292 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 ZNF500O60304 480 aaPredicted RBP25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 ITGB3BPQ13352 177 aaPredicted RBP25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 CTTNQ14247 550 aaKnown RBP25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 NR1I3Q14994 352 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 HSP90AA4PQ58FG1 418 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 CENPPQ6IPU0 288 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 GPAT2Q6NUI2 795 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 MIER3Q7Z3K6 550 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 TMC6Q7Z403 805 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 VSTM4Q8IW00 320 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 TPH2Q8IWU9 490 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 INPP4AQ96PE3 977 aaPredicted RBP25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 NACC1Q96RE7 527 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 TRAF5O00463 557 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 CNMDO75829 334 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 SLC25A27O95847 323 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 GJA5P36382 358 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 INTS13Q9NVM9 706 aa25.42■■□□□ 1.66
SCAMP3-202ENST00000355379 KRT18P05783 430 aaKnown RBP25.41■■□□□ 1.66
SCAMP3-202ENST00000355379 PMS1P54277 932 aaKnown RBP25.41■■□□□ 1.66
SCAMP3-202ENST00000355379 GIT2Q14161 759 aa25.41■■□□□ 1.66
SCAMP3-202ENST00000355379 FILIP1LQ4L180 1135 aa25.41■■□□□ 1.66
SCAMP3-202ENST00000355379 FAM26FQ5R3K3 315 aa25.41■■□□□ 1.66
SCAMP3-202ENST00000355379 FILIP1Q7Z7B0 1213 aa25.41■■□□□ 1.66
SCAMP3-202ENST00000355379 ANKRD20A12PQ8NF67 263 aa25.41■■□□□ 1.66
SCAMP3-202ENST00000355379 HPS3Q969F9 1004 aa25.41■■□□□ 1.66
SCAMP3-202ENST00000355379 CDHR1Q96JP9 859 aa25.41■■□□□ 1.66
SCAMP3-202ENST00000355379 DUSP9Q99956 384 aaKnown RBP25.41■■□□□ 1.66
SCAMP3-202ENST00000355379 TESPA1A2RU30 521 aaPredicted RBP25.4■■□□□ 1.66
SCAMP3-202ENST00000355379 TRIM49BA6NDI0 452 aa25.4■■□□□ 1.66
SCAMP3-202ENST00000355379 P4HBP07237 508 aaKnown RBP25.4■■□□□ 1.66
SCAMP3-202ENST00000355379 TCP11X2Q5H9J9 407 aa25.4■■□□□ 1.66
SCAMP3-202ENST00000355379 ANKRD35Q8N283 1001 aa25.4■■□□□ 1.66
SCAMP3-202ENST00000355379 RDM1Q8NG50 284 aa25.4■■□□□ 1.66
SCAMP3-202ENST00000355379 TRIM47Q96LD4 638 aa25.4■■□□□ 1.66
SCAMP3-202ENST00000355379 BHMT2Q9H2M3 363 aa25.4■■□□□ 1.66
SCAMP3-202ENST00000355379 RRAGCQ9HB90 399 aa25.4■■□□□ 1.66
SCAMP3-202ENST00000355379 ADD3Q9UEY8 706 aaKnown RBP25.4■■□□□ 1.66
SCAMP3-202ENST00000355379 COBLO75128 1261 aa25.39■■□□□ 1.66
SCAMP3-202ENST00000355379 EEF1GP26641 437 aaKnown RBP25.39■■□□□ 1.66
SCAMP3-202ENST00000355379 CLCN1P35523 988 aa25.39■■□□□ 1.66
SCAMP3-202ENST00000355379 KRT76Q01546 638 aa25.39■■□□□ 1.66
SCAMP3-202ENST00000355379 LRRC8AQ8IWT6 810 aa25.39■■□□□ 1.66
SCAMP3-202ENST00000355379 CCDC150Q8NCX0 1101 aa25.39■■□□□ 1.66
SCAMP3-202ENST00000355379 SENP7Q9BQF6 1050 aa25.39■■□□□ 1.66
SCAMP3-202ENST00000355379 KCND2Q9NZV8 630 aa25.39■■□□□ 1.66
SCAMP3-202ENST00000355379 PCDHA2Q9Y5H9 948 aa25.39■■□□□ 1.66
SCAMP3-202ENST00000355379 NPHP3-ACAD11A0A0J9YXS1 232 aa25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 KCNJ18B7U540 433 aa25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 DDX39AO00148 427 aaKnown RBP25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 SFNP31947 248 aa25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 JAK3P52333 1124 aa25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 KCNJ12Q14500 433 aa25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 ANKRD40Q6AI12 368 aa25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 MYOCDQ8IZQ8 938 aa25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 GTF3C2Q8WUA4 911 aaPredicted RBP25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 CACTINQ8WUQ7 758 aaKnown RBP25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 LXNQ9BS40 222 aa25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 SRRTQ9BXP5 876 aaKnown RBP25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 MOV10L1Q9BXT6 1211 aaKnown RBP25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 SEMA6BQ9H3T3 888 aa25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 RTN4Q9NQC3 1192 aaKnown RBP25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 PKD2L1Q9P0L9 805 aa25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 TCEAL9Q9UHQ7 104 aa25.38■■□□□ 1.65
SCAMP3-202ENST00000355379 KIF20AO95235 890 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 LYPLA2O95372 231 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 LRRC63Q05C16 580 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 KRT31Q15323 416 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 HERC4Q5GLZ8 1057 aaPredicted RBP25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 RINT1Q6NUQ1 792 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 IRF2BP1Q8IU81 584 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 FAM114A1Q8IWE2 563 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 CSGALNACT2Q8N6G5 542 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 ZSWIM4Q9H7M6 989 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 ZNF408Q9H9D4 720 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 RBPJLQ9UBG7 517 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 PNMA3Q9UL41 463 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 SLC45A1Q9Y2W3 748 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 NFASCO94856 1347 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 WDR81Q562E7 1941 aa25.37■■□□□ 1.65
SCAMP3-202ENST00000355379 ATP9AO75110 1047 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms