RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 CAND2O75155 1236 aa18.26■□□□□ 0.51
PDGFA-201ENST00000354513 COL9A1P20849 921 aa18.26■□□□□ 0.51
PDGFA-201ENST00000354513 MCM5P33992 734 aa18.26■□□□□ 0.51
PDGFA-201ENST00000354513 LIFRP42702 1097 aa18.26■□□□□ 0.51
PDGFA-201ENST00000354513 XRRA1Q6P2D8 792 aa18.26■□□□□ 0.51
PDGFA-201ENST00000354513 RUFY4Q6ZNE9 571 aa18.26■□□□□ 0.51
PDGFA-201ENST00000354513 IL27Q8NEV9 243 aa18.26■□□□□ 0.51
PDGFA-201ENST00000354513 LZTS2Q9BRK4 669 aa18.26■□□□□ 0.51
PDGFA-201ENST00000354513 UBIAD1Q9Y5Z9 338 aa18.26■□□□□ 0.51
PDGFA-201ENST00000354513 CNTNAP5Q8WYK1 1306 aa18.26■□□□□ 0.51
PDGFA-201ENST00000354513 TTC3P53804 2025 aa18.25■□□□□ 0.51
PDGFA-201ENST00000354513 AMHP03971 560 aa18.25■□□□□ 0.51
PDGFA-201ENST00000354513 TCF7P36402 384 aaPredicted RBP18.25■□□□□ 0.51
PDGFA-201ENST00000354513 MGAT3Q09327 533 aa18.25■□□□□ 0.51
PDGFA-201ENST00000354513 AAK1Q2M2I8 961 aa18.25■□□□□ 0.51
PDGFA-201ENST00000354513 TYW1BQ6NUM6 668 aa18.25■□□□□ 0.51
PDGFA-201ENST00000354513 TMTC3Q6ZXV5 915 aa18.25■□□□□ 0.51
PDGFA-201ENST00000354513 CUL5Q93034 780 aa18.25■□□□□ 0.51
PDGFA-201ENST00000354513 HLA-CQ95604 372 aa18.25■□□□□ 0.51
PDGFA-201ENST00000354513 GPRASP2Q96D09 838 aa18.25■□□□□ 0.51
PDGFA-201ENST00000354513 SEC63Q9UGP8 760 aaKnown RBP18.25■□□□□ 0.51
PDGFA-201ENST00000354513 INSL6Q9Y581 213 aa18.25■□□□□ 0.51
PDGFA-201ENST00000354513 CCDC69A6NI79 296 aa18.24■□□□□ 0.51
PDGFA-201ENST00000354513 CHRNA1P02708 482 aa18.24■□□□□ 0.51
PDGFA-201ENST00000354513 ARHGAP4P98171 946 aa18.24■□□□□ 0.51
PDGFA-201ENST00000354513 NFXL1Q6ZNB6 911 aa18.24■□□□□ 0.51
PDGFA-201ENST00000354513 KHSRPQ92945 711 aaKnown RBP eCLIP18.24■□□□□ 0.51
PDGFA-201ENST00000354513 TOP1MTQ969P6 601 aa18.24■□□□□ 0.51
PDGFA-201ENST00000354513 ZNF215Q9UL58 517 aaPredicted RBP18.24■□□□□ 0.51
PDGFA-201ENST00000354513 PLXNA4Q9HCM2 1894 aa18.24■□□□□ 0.51
PDGFA-201ENST00000354513 NEFLP07196 543 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 LINC00271P0C7V0 271 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 GNAQP50148 359 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 MARCH8Q5T0T0 291 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 NLRX1Q86UT6 975 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 SGMS1Q86VZ5 419 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 FBXO22Q8NEZ5 403 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 SEPT8Q92599 483 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 PCYT2Q99447 389 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 PSTPIP2Q9H939 334 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.23■□□□□ 0.51
PDGFA-201ENST00000354513 FUT2Q10981 343 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 RPAINQ86UA6 219 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 TMTC2Q8N394 836 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 CCDC82Q8N4S0 544 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 ZBTB10Q96DT7 871 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 UBE2ZQ9H832 354 aaPredicted RBP18.23■□□□□ 0.51
PDGFA-201ENST00000354513 EHMT1Q9H9B1 1298 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 RC3H2Q9HBD1 1191 aaKnown RBP18.23■□□□□ 0.51
PDGFA-201ENST00000354513 PKD2L1Q9P0L9 805 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 PCDHA6Q9UN73 950 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 PCDHA8Q9Y5H6 950 aa18.23■□□□□ 0.51
PDGFA-201ENST00000354513 EVPLQ92817 2033 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 FNDC1Q4ZHG4 1894 aaPredicted RBP18.22■□□□□ 0.51
PDGFA-201ENST00000354513 NRCAMQ92823 1304 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 MBLAC1A4D2B0 266 aaPredicted RBP18.22■□□□□ 0.51
PDGFA-201ENST00000354513 CALM1P0DP23 149 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 CALM2P0DP24 149 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 CALM3P0DP25 149 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 GNAT1P11488 350 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 MARK3P27448 753 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 EPC2Q52LR7 807 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 WWC2Q6AWC2 1192 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 MICU3Q86XE3 530 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 FANCBQ8NB91 859 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 IFIH1Q9BYX4 1025 aaKnown RBP18.22■□□□□ 0.51
PDGFA-201ENST00000354513 CD320Q9NPF0 282 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 JADE2Q9NQC1 790 aa18.22■□□□□ 0.51
PDGFA-201ENST00000354513 MYH9P35579 1960 aaKnown RBP18.21■□□□□ 0.51
PDGFA-201ENST00000354513 UPP2O95045 317 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 GHRP10912 638 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 PPFIA1Q13136 1202 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 MTMR1Q13613 665 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 LPIN1Q14693 890 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 GRIK4Q16099 956 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 APOA5Q6Q788 366 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 GIMAP8Q8ND71 665 aaPredicted RBP18.21■□□□□ 0.51
PDGFA-201ENST00000354513 LINC01599Q8WXQ3 324 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 APBB2Q92870 758 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 PGBD1Q96JS3 809 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 TCEANC2Q96MN5 208 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 EPHX3Q9H6B9 360 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 ANO2Q9NQ90 1003 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 BRPF3Q9ULD4 1205 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 SLC12A7Q9Y666 1083 aa18.21■□□□□ 0.51
PDGFA-201ENST00000354513 EXOSC10Q01780 885 aaKnown RBP18.2■□□□□ 0.5
PDGFA-201ENST00000354513 HEATR3Q7Z4Q2 680 aa18.2■□□□□ 0.5
PDGFA-201ENST00000354513 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.2■□□□□ 0.5
PDGFA-201ENST00000354513 CYP2W1Q8TAV3 490 aa18.2■□□□□ 0.5
PDGFA-201ENST00000354513 SEPT1Q8WYJ6 367 aa18.2■□□□□ 0.5
PDGFA-201ENST00000354513 YME1L1Q96TA2 773 aa18.2■□□□□ 0.5
PDGFA-201ENST00000354513 C5orf42Q9H799 3197 aa18.19■□□□□ 0.5
PDGFA-201ENST00000354513 H3BNC9 293 aa18.19■□□□□ 0.5
PDGFA-201ENST00000354513 ADCK5Q3MIX3 580 aa18.19■□□□□ 0.5
PDGFA-201ENST00000354513 FBXO47Q5MNV8 452 aa18.19■□□□□ 0.5
PDGFA-201ENST00000354513 TMEM192Q8IY95 271 aa18.19■□□□□ 0.5
PDGFA-201ENST00000354513 RASEFQ8IZ41 740 aa18.19■□□□□ 0.5
PDGFA-201ENST00000354513 DNAJB3Q8WWF6 145 aa18.19■□□□□ 0.5
PDGFA-201ENST00000354513 MRPL38Q96DV4 380 aaKnown RBP18.19■□□□□ 0.5
PDGFA-201ENST00000354513 CDHR1Q96JP9 859 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms