RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 MAD1L1Q9Y6D9 718 aa12.19□□□□□ -0.46
SLC6A20-201ENST00000353278 PLA2R1Q13018 1463 aa12.19□□□□□ -0.46
SLC6A20-201ENST00000353278 F5H6K3 240 aa12.19□□□□□ -0.46
SLC6A20-201ENST00000353278 SNAP23O00161 211 aa12.19□□□□□ -0.46
SLC6A20-201ENST00000353278 PEX3P56589 373 aa12.19□□□□□ -0.46
SLC6A20-201ENST00000353278 ZNF445P59923 1031 aa12.19□□□□□ -0.46
SLC6A20-201ENST00000353278 KLRC3Q07444 240 aa12.19□□□□□ -0.46
SLC6A20-201ENST00000353278 ZNF667Q5HYK9 610 aa12.19□□□□□ -0.46
SLC6A20-201ENST00000353278 OR6B3Q8NGW1 331 aa12.19□□□□□ -0.46
SLC6A20-201ENST00000353278 EPHB1P54762 984 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 TRIM28Q13263 835 aaKnown RBP12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 ARL13BQ3SXY8 428 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 STRIP1Q5VSL9 837 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 ARL6IP4Q66PJ3 421 aaKnown RBP12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 EEF2KMTQ96G04 330 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 HEXIM2Q96MH2 286 aaKnown RBP12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 DCP1AQ9NPI6 582 aaPredicted RBP12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 SFNP31947 248 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 TSPY1Q01534 308 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 MESDQ14696 234 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 PPP1R18Q6NYC8 613 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 TMTC3Q6ZXV5 915 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 NEK9Q8TD19 979 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 RAB3IPQ96QF0 476 aaPredicted RBP12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 ELP3Q9H9T3 547 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 PIDD1Q9HB75 910 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 CD58P19256 250 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 MAPK4P31152 587 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 RECQLP46063 649 aaPredicted RBP12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 GOLGA8FQ08AF8 430 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 GOLGA8DPQ0D2H9 430 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 NDUFAF2Q8N183 169 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 SCYL1Q96KG9 808 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 DDX41Q9UJV9 622 aaKnown RBP12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 CLDN3O15551 220 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 BUB1O43683 1085 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 ATF2P15336 505 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 GKAP1Q5VSY0 366 aaPredicted RBP12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 RNF219Q5W0B1 726 aaPredicted RBP12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 ZFYVE28Q9HCC9 887 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 C1orf167Q5SNV9 1468 aa12.18□□□□□ -0.46
SLC6A20-201ENST00000353278 CCDC160A6NGH7 325 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 WDR46O15213 610 aaKnown RBP12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 MNAT1P51948 309 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 ANKRD20A3Q5VUR7 823 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 PARK7Q99497 189 aaKnown RBP12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 LBHD1Q9BQE6 289 aaPredicted RBP12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 C2orf40Q9H1Z8 148 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 KIAA1586Q9HCI6 787 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 PRDM5Q9NQX1 630 aaPredicted RBP12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 LRRN2O75325 713 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 PRELPP51888 382 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 HMGCS2P54868 508 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 EPHA10Q5JZY3 1008 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 ZNF302Q9NR11 478 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 SPATA31A1Q5TZJ5 1347 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 PLCG1P19174 1290 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 SNAPC2Q13487 334 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 ZNF658Q5TYW1 1059 aaPredicted RBP12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 KCNV1Q6PIU1 500 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 VSIG1Q86XK7 387 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 ARHGAP24Q8N264 748 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 CEP95Q96GE4 821 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 FAM20AQ96MK3 541 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 HUS1O60921 280 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 RUNDC3BQ96NL0 473 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 TRIM56Q9BRZ2 755 aaKnown RBP12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 TET3O43151 1660 aa12.17□□□□□ -0.46
SLC6A20-201ENST00000353278 KBTBD13C9JR72 458 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 PRR5LQ6MZQ0 368 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 PPP4R3CPQ6ZMV5 832 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 PNMA8AQ86V59 439 aaPredicted RBP12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 BEST2Q8NFU1 509 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 TBC1D16Q8TBP0 767 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 AFAP1L1Q8TED9 768 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 ZBTB9Q96C00 473 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 GCOM2Q9BZD3 368 aaPredicted RBP12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 PASKQ96RG2 1323 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 SAT1P21673 171 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 SCARA5Q6ZMJ2 495 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 SPATA33Q96N06 139 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 ANGPTL3Q9Y5C1 460 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 RGS16O15492 202 aaPredicted RBP12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 BNIP3LO60238 219 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 PRPSAP2O60256 369 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 PLEKHA8P1O95397 391 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 PSMD6Q15008 389 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 ZNF568Q3ZCX4 644 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 BARGINQ6ZT62 677 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 SLC44A5Q8NCS7 719 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 TSC1Q92574 1164 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 MCUR1Q96AQ8 359 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 RILPQ96NA2 401 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 MTA3Q9BTC8 594 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 RPAP3Q9H6T3 665 aaPredicted RBP12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 UBN1Q9NPG3 1134 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 GCNT4Q9P109 453 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 IGSF3O75054 1194 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 CCNE1P24864 410 aa12.16□□□□□ -0.46
SLC6A20-201ENST00000353278 GBP1P32455 592 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms