RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 DOCK1Q14185 1865 aa7.7□□□□□ -1.18
TRIM55-203ENST00000350034 ATAD5Q96QE3 1844 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 RASSF10A6NK89 507 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 KIF2AO00139 706 aaPredicted RBP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 DHX15O43143 795 aaKnown RBP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 CCP110O43303 1012 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 DDNO94850 711 aaPredicted RBP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 FGFR1OPO95684 399 aaKnown RBP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 ALAS1P13196 640 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 GTF2F1P35269 517 aaKnown RBP eCLIP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 FXR1P51114 621 aaKnown RBP eCLIP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 PABPC4Q13310 644 aaKnown RBP eCLIP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 BMT2Q1RMZ1 405 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 MIIPQ5JXC2 388 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 DNTTIP2Q5QJE6 756 aaKnown RBP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 XRRA1Q6P2D8 792 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 CATSPERGQ6ZRH7 1159 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 C1orf186Q6ZWK4 172 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 EPM2AIP1Q7L775 607 aaPredicted RBP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 PPFIBP1Q86W92 1011 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 CNGA4Q8IV77 575 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 REXO1L1PQ8IX06 675 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 CPXCR1Q8N123 301 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 GLIS3Q8NEA6 775 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 MYRIPQ8NFW9 859 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 IL31RAQ8NI17 732 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 NEK9Q8TD19 979 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 SCFD1Q8WVM8 642 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 CNOT6LQ96LI5 555 aaKnown RBP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 C16orf45Q96MC5 204 aaPredicted RBP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 ERGIC2Q96RQ1 377 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 TUBGCP2Q9BSJ2 902 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 TEKT3Q9BXF9 490 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 FGFBP2Q9BYJ0 223 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 KCTD10Q9H3F6 313 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 UNC45AQ9H3U1 944 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 JADE2Q9NQC1 790 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 ADARB2Q9NS39 739 aaKnown RBP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 RGL1Q9NZL6 768 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 ZNF214Q9UL59 606 aaPredicted RBP7.69□□□□□ -1.18
TRIM55-203ENST00000350034 SNCAIPQ9Y6H5 919 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 ZHX2Q9Y6X8 837 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 A0A0C4DFX4 3053 aa7.69□□□□□ -1.18
TRIM55-203ENST00000350034 DICER1Q9UPY3 1922 aaKnown RBP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 NPHP3-ACAD11A0A0J9YXS1 232 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 RNF225M0QZC1 329 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 IPO5O00410 1097 aaKnown RBP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 GAS7O60861 476 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 KIF20AO95235 890 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 LYPLA2O95372 231 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 SSBP05455 408 aaKnown RBP eCLIP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 CASP14P31944 242 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 HMGCS2P54868 508 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 MARSP56192 900 aaKnown RBP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 RPS6P62753 249 aaKnown RBP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 UBXN2AP68543 259 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 MAP3K9P80192 1104 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 MRPS9P82933 396 aaKnown RBP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 FKBP3Q00688 224 aaKnown RBP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 UBXN1Q04323 297 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 FSTL1Q12841 308 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 COG2Q14746 738 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 PGM5Q15124 567 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 LRRC41Q15345 812 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 PTPN14Q15678 1187 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 EDRF1Q3B7T1 1238 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 TKFCQ3LXA3 575 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 HERC4Q5GLZ8 1057 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 FIGNQ5HY92 759 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 RINT1Q6NUQ1 792 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 SAMD1Q6SPF0 538 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 SLC30A10Q6XR72 485 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 RETREG2Q8NC44 543 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 DYDC2Q96IM9 177 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 WNK4Q96J92 1243 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 CEP63Q96MT8 703 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 TRERF1Q96PN7 1200 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 TAAR1Q96RJ0 339 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 REEP2Q9BRK0 252 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 PDCD2LQ9BRP1 358 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 ZNF577Q9BSK1 485 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 RUSC1Q9BVN2 902 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 TTYH3Q9C0H2 523 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 AGO4Q9HCK5 861 aaKnown RBP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 KCNH7Q9NS40 1196 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 TRMT1Q9NXH9 659 aaKnown RBP7.68□□□□□ -1.18
TRIM55-203ENST00000350034 CAPN11Q9UMQ6 739 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 TRAF3IP3Q9Y228 551 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 RIPK3Q9Y572 518 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 PAXBP1Q9Y5B6 917 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 SMCHD1A6NHR9 2005 aa7.68□□□□□ -1.18
TRIM55-203ENST00000350034 GOLGA6L9A6NEM1 432 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 SPDYE16A6NNV3 312 aaPredicted RBP7.67□□□□□ -1.18
TRIM55-203ENST00000350034 B4DLN1 442 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 NKRFO15226 690 aaKnown RBP eCLIP7.67□□□□□ -1.18
TRIM55-203ENST00000350034 ZSCAN12O43309 604 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 TPM1P09493 284 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 GAP43P17677 238 aa7.67□□□□□ -1.18
TRIM55-203ENST00000350034 HOXD13P35453 343 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms