RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 MRPL12P52815 198 aaKnown RBP19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 CACNB3P54284 484 aa19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 CRY2Q49AN0 593 aa19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 TTMPQ5BVD1 217 aa19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 PROM2Q8N271 834 aa19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 BMP2KQ9NSY1 1161 aaPredicted RBP19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 ATP6V0A2Q9Y487 856 aa19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 PCDHAC2Q9Y5I4 1007 aa19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 ZBTB5O15062 677 aa19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 PPFIA4O75335 1185 aa19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 GUCY2FP51841 1108 aa19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 GUCY2DQ02846 1103 aa19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 ITIH3Q06033 890 aa19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 DOK7Q18PE1 504 aa19.93■□□□□ 0.78
PTP4A3-202ENST00000349124 hCG_1984214I3L0E3 225 aa19.92■□□□□ 0.78
PTP4A3-202ENST00000349124 VPS72Q15906 364 aa19.92■□□□□ 0.78
PTP4A3-202ENST00000349124 ZNF713Q8N859 430 aaPredicted RBP19.92■□□□□ 0.78
PTP4A3-202ENST00000349124 KRT12Q99456 494 aa19.92■□□□□ 0.78
PTP4A3-202ENST00000349124 RBAK-RBAKDNI3L0D1 243 aa19.92■□□□□ 0.78
PTP4A3-202ENST00000349124 KLHL30Q0D2K2 578 aa19.92■□□□□ 0.78
PTP4A3-202ENST00000349124 KCNH2Q12809 1159 aa19.92■□□□□ 0.78
PTP4A3-202ENST00000349124 NAB2Q15742 525 aa19.92■□□□□ 0.78
PTP4A3-202ENST00000349124 CFAP221Q4G0U5 840 aa19.92■□□□□ 0.78
PTP4A3-202ENST00000349124 SLC30A10Q6XR72 485 aa19.92■□□□□ 0.78
PTP4A3-202ENST00000349124 CERS3Q8IU89 383 aa19.92■□□□□ 0.78
PTP4A3-202ENST00000349124 IKZF4Q9H2S9 585 aa19.92■□□□□ 0.78
PTP4A3-202ENST00000349124 GYS1P13807 737 aa19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 SLF2Q8IX21 1173 aa19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 RBM17Q96I25 401 aaKnown RBP19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 ZIM3Q96PE6 472 aa19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 LRRC27Q9C0I9 530 aa19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 ATF5Q9Y2D1 282 aaPredicted RBP19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 COL24A1Q17RW2 1714 aa19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 HEXIM1O94992 359 aaKnown RBP19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 KRT18P05783 430 aaKnown RBP19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 CCT5P48643 541 aa19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 EPHB4P54760 987 aa19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 PABPC4Q13310 644 aaKnown RBP eCLIP19.91■□□□□ 0.782e-15■■□□□ 14.1
PTP4A3-202ENST00000349124 SLC18A3Q16572 532 aa19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 QRICH1Q2TAL8 776 aa19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 CCDC65Q8IXS2 484 aa19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 RNF10Q8N5U6 811 aaKnown RBP19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 PCDHA1Q9Y5I3 950 aa19.91■□□□□ 0.78
PTP4A3-202ENST00000349124 TBC1D22AQ8WUA7 517 aa19.9■□□□□ 0.78
PTP4A3-202ENST00000349124 SH3GL2Q99962 352 aa19.9■□□□□ 0.78
PTP4A3-202ENST00000349124 EDEM3Q9BZQ6 932 aa19.9■□□□□ 0.78
PTP4A3-202ENST00000349124 GRID2IPA4D2P6 1211 aa19.9■□□□□ 0.78
PTP4A3-202ENST00000349124 PTK2Q05397 1052 aa19.9■□□□□ 0.78
PTP4A3-202ENST00000349124 TCP10Q12799 353 aa19.9■□□□□ 0.78
PTP4A3-202ENST00000349124 KLHL7Q8IXQ5 586 aa19.9■□□□□ 0.78
PTP4A3-202ENST00000349124 GANQ9H2C0 597 aa19.9■□□□□ 0.78
PTP4A3-202ENST00000349124 SHOX2O60902 331 aaPredicted RBP19.89■□□□□ 0.78
PTP4A3-202ENST00000349124 NR2F2P24468 414 aa19.89■□□□□ 0.78
PTP4A3-202ENST00000349124 HOXD13P35453 343 aa19.89■□□□□ 0.78
PTP4A3-202ENST00000349124 ATP1A2P50993 1020 aa19.89■□□□□ 0.78
PTP4A3-202ENST00000349124 PRR16Q569H4 304 aa19.89■□□□□ 0.78
PTP4A3-202ENST00000349124 CATSPER3Q86XQ3 398 aa19.89■□□□□ 0.78
PTP4A3-202ENST00000349124 CERKQ8TCT0 537 aa19.89■□□□□ 0.78
PTP4A3-202ENST00000349124 CCDC43Q96MW1 224 aaKnown RBP19.89■□□□□ 0.78
PTP4A3-202ENST00000349124 KCNQ5Q9NR82 932 aa19.89■□□□□ 0.78
PTP4A3-202ENST00000349124 GNGT1P63211 74 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 KCNA1Q09470 495 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 CDC42EP5Q6NZY7 148 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 ZNF571Q7Z3V5 609 aaPredicted RBP19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 CEP63Q96MT8 703 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 CAPS2Q9BXY5 557 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 CDK5RAP2Q96SN8 1893 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 RSPH10B2B2RC85 870 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 BBOX1O75936 387 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 RSPH10BP0C881 870 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 POLD1P28340 1107 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 SLC12A3P55017 1021 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 HYIQ5T013 277 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 MEI1Q5TIA1 1274 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 CASKIN2Q8WXE0 1202 aa19.89■□□□□ 0.77
PTP4A3-202ENST00000349124 EPS15P42566 896 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 EMBQ6PCB8 327 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 GJB7Q6PEY0 223 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 NT5C3AQ9H0P0 336 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 DHX36Q9H2U1 1008 aaKnown RBP19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 DNAJC18Q9H819 358 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 AJAP1Q9UKB5 411 aaPredicted RBP19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 PLIN4Q96Q06 1357 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 SFI1A8K8P3 1242 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 MYBP10242 640 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 CYP4A11Q02928 519 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 DDR1Q08345 913 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 ASIC2Q16515 512 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 DPY19L2P1Q6NXN4 242 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 IRF2BP2Q7Z5L9 587 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 CYP2W1Q8TAV3 490 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 BCAS4Q8TDM0 211 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 SYN2Q92777 582 aaPredicted RBP19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 INPP4AQ96PE3 977 aaPredicted RBP19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 ANO3Q9BYT9 981 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 TSPYL1Q9H0U9 437 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 KCNMB3Q9NPA1 279 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 SAMM50Q9Y512 469 aa19.88■□□□□ 0.77
PTP4A3-202ENST00000349124 GRIN2DO15399 1336 aa19.87■□□□□ 0.77
PTP4A3-202ENST00000349124 ZNF233A6NK53 670 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms