RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 SREBF1P36956 1147 aa15.2■□□□□ 0.02
CLCC1-202ENST00000348264 AP3B2Q13367 1082 aa15.2■□□□□ 0.02
CLCC1-202ENST00000348264 TOB2Q14106 344 aaPredicted RBP15.2■□□□□ 0.02
CLCC1-202ENST00000348264 NTRK3Q16288 839 aa15.2■□□□□ 0.02
CLCC1-202ENST00000348264 RUFY3Q7L099 469 aa15.2■□□□□ 0.02
CLCC1-202ENST00000348264 PHKBQ93100 1093 aa15.2■□□□□ 0.02
CLCC1-202ENST00000348264 SLC9A7Q96T83 725 aa15.2■□□□□ 0.02
CLCC1-202ENST00000348264 MXRA8Q9BRK3 442 aa15.2■□□□□ 0.02
CLCC1-202ENST00000348264 PRDM12Q9H4Q4 367 aa15.2■□□□□ 0.02
CLCC1-202ENST00000348264 NCOA5Q9HCD5 579 aaKnown RBP15.2■□□□□ 0.02
CLCC1-202ENST00000348264 ZSWIM6Q9HCJ5 1215 aa15.2■□□□□ 0.02
CLCC1-202ENST00000348264 KCNH7Q9NS40 1196 aa15.2■□□□□ 0.02
CLCC1-202ENST00000348264 SETD4Q9NVD3 440 aa15.2■□□□□ 0.02
CLCC1-202ENST00000348264 PCDHA11Q9Y5I1 949 aa15.2■□□□□ 0.02
CLCC1-202ENST00000348264 REV3LO60673 3130 aa15.19■□□□□ 0.02
CLCC1-202ENST00000348264 PRRC2BQ5JSZ5 2229 aaKnown RBP15.19■□□□□ 0.02
CLCC1-202ENST00000348264 ESYT2A0FGR8 921 aa15.19■□□□□ 0.02
CLCC1-202ENST00000348264 PRPF3O43395 683 aaKnown RBP15.19■□□□□ 0.02
CLCC1-202ENST00000348264 BAIAP3O94812 1187 aa15.19■□□□□ 0.02
CLCC1-202ENST00000348264 PARNO95453 639 aaKnown RBP15.19■□□□□ 0.02
CLCC1-202ENST00000348264 PDIA3P30101 505 aaKnown RBP15.19■□□□□ 0.02
CLCC1-202ENST00000348264 THPOP40225 353 aa15.19■□□□□ 0.02
CLCC1-202ENST00000348264 EVCP57679 992 aa15.19■□□□□ 0.02
CLCC1-202ENST00000348264 WDR5P61964 334 aaKnown RBP15.19■□□□□ 0.02
CLCC1-202ENST00000348264 JAKMIP3Q5VZ66 844 aa15.19■□□□□ 0.02
CLCC1-202ENST00000348264 CNKSR3Q6P9H4 555 aa15.19■□□□□ 0.02
CLCC1-202ENST00000348264 LMBR1Q8WVP7 490 aa15.19■□□□□ 0.02
CLCC1-202ENST00000348264 UPF3BQ9BZI7 483 aaKnown RBP15.19■□□□□ 0.02
CLCC1-202ENST00000348264 GLT8D2Q9H1C3 349 aa15.19■□□□□ 0.02
CLCC1-202ENST00000348264 SLC28A3Q9HAS3 691 aa15.19■□□□□ 0.02
CLCC1-202ENST00000348264 JPH1Q9HDC5 661 aaPredicted RBP15.19■□□□□ 0.02
CLCC1-202ENST00000348264 TTC28Q96AY4 2481 aa15.19■□□□□ 0.02
CLCC1-202ENST00000348264 MAFGO15525 162 aa15.18■□□□□ 0.02
CLCC1-202ENST00000348264 ARP10275 920 aa15.18■□□□□ 0.02
CLCC1-202ENST00000348264 CCT2P78371 535 aaKnown RBP15.18■□□□□ 0.02
CLCC1-202ENST00000348264 ADAM17P78536 824 aa15.18■□□□□ 0.02
CLCC1-202ENST00000348264 ARHGAP4P98171 946 aa15.18■□□□□ 0.02
CLCC1-202ENST00000348264 CEP55Q53EZ4 464 aa15.18■□□□□ 0.02
CLCC1-202ENST00000348264 PPP2R2DQ66LE6 453 aa15.18■□□□□ 0.02
CLCC1-202ENST00000348264 HERC6Q8IVU3 1022 aa15.18■□□□□ 0.02
CLCC1-202ENST00000348264 SEPT1Q8WYJ6 367 aa15.18■□□□□ 0.02
CLCC1-202ENST00000348264 ZMYND12Q9H0C1 365 aa15.18■□□□□ 0.02
CLCC1-202ENST00000348264 CYP46A1Q9Y6A2 500 aa15.18■□□□□ 0.02
CLCC1-202ENST00000348264 EMSYQ7Z589 1322 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 WDR81Q562E7 1941 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 RSPH10B2B2RC85 870 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 ARHGEF15O94989 841 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 CA3P07451 260 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 CTSHP09668 335 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 RSPH10BP0C881 870 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 IFNAR1P17181 557 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 MARK3P27448 753 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 KCNJ6P48051 423 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 DEFB103AP81534 67 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 ITGB3BPQ13352 177 aaPredicted RBP15.17■□□□□ 0.02
CLCC1-202ENST00000348264 ADGRE1Q14246 886 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 ERICH6BQ5W0A0 696 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 TMCO2Q7Z6W1 182 aaPredicted RBP15.17■□□□□ 0.02
CLCC1-202ENST00000348264 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLCC1-202ENST00000348264 USP38Q8NB14 1042 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 PHOSPHO2Q8TCD6 241 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 CRYGNQ8WXF5 182 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 PCYT2Q99447 389 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 LARP6Q9BRS8 491 aaKnown RBP15.17■□□□□ 0.02
CLCC1-202ENST00000348264 SLC26A6Q9BXS9 759 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 RNF26Q9BY78 433 aaPredicted RBP15.17■□□□□ 0.02
CLCC1-202ENST00000348264 OSBPL7Q9BZF2 842 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 TM6SF1Q9BZW5 370 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 AGO4Q9HCK5 861 aaKnown RBP15.17■□□□□ 0.02
CLCC1-202ENST00000348264 SLC9A2Q9UBY0 812 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 NFASCO94856 1347 aa15.17■□□□□ 0.02
CLCC1-202ENST00000348264 MYH9P35579 1960 aaKnown RBP15.16■□□□□ 0.02
CLCC1-202ENST00000348264 COL4A4P53420 1690 aaPredicted RBP15.16■□□□□ 0.02
CLCC1-202ENST00000348264 LOXHD1Q8IVV2 1947 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 FAM86B1E9PN63 330 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 MEIS1O00470 390 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 LGR5O75473 907 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 FAM86B2P0C5J1 330 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 GNAT1P11488 350 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 PPFIA1Q13136 1202 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 RUFY4Q6ZNE9 571 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 REXO1Q8N1G1 1221 aaKnown RBP15.16■□□□□ 0.02
CLCC1-202ENST00000348264 RASGRP4Q8TDF6 673 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 CCDC12Q8WUD4 166 aaPredicted RBP15.16■□□□□ 0.02
CLCC1-202ENST00000348264 GLG1Q92896 1179 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 GAS2L1Q99501 681 aaPredicted RBP15.16■□□□□ 0.02
CLCC1-202ENST00000348264 C6orf50Q9HD87 102 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 ERAP1Q9NZ08 941 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 NRCAMQ92823 1304 aa15.16■□□□□ 0.02
CLCC1-202ENST00000348264 IGLV3-22A0A075B6J6 115 aa15.15■□□□□ 0.02
CLCC1-202ENST00000348264 CAND2O75155 1236 aa15.15■□□□□ 0.02
CLCC1-202ENST00000348264 ACTR2P61160 394 aa15.15■□□□□ 0.02
CLCC1-202ENST00000348264 AKAP17AQ02040 695 aaKnown RBP15.15■□□□□ 0.02
CLCC1-202ENST00000348264 MKRN4PQ13434 485 aaPredicted RBP15.15■□□□□ 0.02
CLCC1-202ENST00000348264 GRIK4Q16099 956 aa15.15■□□□□ 0.02
CLCC1-202ENST00000348264 SDF4Q9BRK5 362 aa15.15■□□□□ 0.02
CLCC1-202ENST00000348264 SMARCAD1Q9H4L7 1026 aa15.15■□□□□ 0.02
CLCC1-202ENST00000348264 VPS54Q9P1Q0 977 aa15.15■□□□□ 0.02
CLCC1-202ENST00000348264 SPTBN5Q9NRC6 3674 aaKnown RBP15.15■□□□□ 0.02
CLCC1-202ENST00000348264 BRWD1Q9NSI6 2320 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms