RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TRAF5O00463 557 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 ATP8B1O43520 1251 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 CLSTN1O94985 981 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 GLI1P08151 1106 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 LMAN1P49257 510 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 MAN2A1Q16706 1144 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 SKIDA1Q1XH10 827 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 ZC2HC1CQ53FD0 456 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 FIGNQ5HY92 759 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 FAM83BQ5T0W9 1011 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 TTC19Q6DKK2 380 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-201ENST00000347613 ZNF662Q6ZS27 426 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 FAM133AQ8N9E0 248 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 ACER1Q8TDN7 264 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 PIGOQ8TEQ8 1089 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 CCDC42Q96M95 316 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 OSBPL9Q96SU4 736 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 SH2D3AQ9BRG2 576 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 REEP2Q9BRK0 252 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 WDR18Q9BV38 432 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 MYO1AQ9UBC5 1043 aa6.69□□□□□ -1.34
CLCN3-201ENST00000347613 TISP43B9A030 160 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 F5H6K3 240 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 CLIC2O15247 247 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 AKAP3O75969 853 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 TPM1P09493 284 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 IRX5P78411 483 aaPredicted RBP6.68□□□□□ -1.34
CLCN3-201ENST00000347613 KLRC3Q07444 240 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 STIM1Q13586 685 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 DACT2Q5SW24 774 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 HYIQ5T013 277 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 HAUS3Q68CZ6 603 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 GPBP1Q86WP2 473 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 TRIM59Q8IWR1 403 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 BANK1Q8NDB2 785 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 SPATA4Q8NEY3 305 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 ANO3Q9BYT9 981 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 ZC3H12CQ9C0D7 883 aaKnown RBP6.68□□□□□ -1.34
CLCN3-201ENST00000347613 COA1Q9GZY4 146 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 GANQ9H2C0 597 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 ADAMTS1Q9UHI8 967 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 BICDL2A1A5D9 508 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 MSH4O15457 936 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 CDK17Q00537 523 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 KRT79Q5XKE5 535 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 HDXQ7Z353 690 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 ZNF571Q7Z3V5 609 aaPredicted RBP6.68□□□□□ -1.34
CLCN3-201ENST00000347613 IRF2BP2Q7Z5L9 587 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 ANKRD20A12PQ8NF67 263 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 CUL5Q93034 780 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 SGSM3Q96HU1 749 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 SELENOOQ9BVL4 669 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 LSM14BQ9BX40 385 aaKnown RBP6.68□□□□□ -1.34
CLCN3-201ENST00000347613 ZHX3Q9H4I2 956 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 SIX2Q9NPC8 291 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 VAV3Q9UKW4 847 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 ZMYM2Q9UBW7 1377 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 SHTN1A0MZ66 631 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 FRMD3A2A2Y4 597 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 PALMO75781 387 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 NDUFB10O96000 172 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 MMP10P09238 476 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 AOC3Q16853 763 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 HERC4Q5GLZ8 1057 aaPredicted RBP6.68□□□□□ -1.34
CLCN3-201ENST00000347613 FAM26FQ5R3K3 315 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 SLFN13Q68D06 897 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 TATDN1Q6P1N9 297 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 LRRC31Q6UY01 552 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 SFR1Q86XK3 245 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 CCDC170Q8IYT3 715 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 MYOCDQ8IZQ8 938 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 MBOAT7Q96N66 472 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 TANGO6Q9C0B7 1094 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 FAM204AQ9H8W3 233 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 QTRT2Q9H974 415 aaKnown RBP6.68□□□□□ -1.34
CLCN3-201ENST00000347613 EMILIN3Q9NT22 766 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 STK17AQ9UEE5 414 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 COL4A3BPQ9Y5P4 624 aa6.68□□□□□ -1.34
CLCN3-201ENST00000347613 PLCG2P16885 1265 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 ARHGAP4P98171 946 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 PTK2Q05397 1052 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 KCNH2Q12809 1159 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 CTTNQ14247 550 aaKnown RBP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 EPM2AIP1Q7L775 607 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 PALB2Q86YC2 1186 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 AENQ8WTP8 325 aaKnown RBP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 TBC1D22AQ8WUA7 517 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 PIK3R5Q8WYR1 880 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 AKT1S1Q96B36 256 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 ARL8AQ96BM9 186 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 FIZ1Q96SL8 496 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 HYOU1Q9Y4L1 999 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 TELO2Q9Y4R8 837 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 ASTN1O14525 1302 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 IGLV3-22A0A075B6J6 115 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 TMEM150BA6NC51 233 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 TGFB1I1O43294 461 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 KRT86O43790 486 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 RNF40O75150 1001 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 GH2P01242 217 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms