RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 CCDC114Q96M63 670 aa19.95■□□□□ 0.78
KRCC1-201ENST00000347055 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.95■□□□□ 0.78
KRCC1-201ENST00000347055 FAM114A2Q9NRY5 505 aa19.95■□□□□ 0.78
KRCC1-201ENST00000347055 DDX20Q9UHI6 824 aaKnown RBP19.95■□□□□ 0.78
KRCC1-201ENST00000347055 KDM3AQ9Y4C1 1321 aa19.94■□□□□ 0.78
KRCC1-201ENST00000347055 KLRF2D3W0D1 207 aa19.94■□□□□ 0.78
KRCC1-201ENST00000347055 DNAJC8O75937 253 aaPredicted RBP19.94■□□□□ 0.78
KRCC1-201ENST00000347055 CTNNA1P35221 906 aaKnown RBP19.94■□□□□ 0.78
KRCC1-201ENST00000347055 SEC24CP53992 1094 aa19.94■□□□□ 0.78
KRCC1-201ENST00000347055 XRCC4Q13426 336 aa19.94■□□□□ 0.78
KRCC1-201ENST00000347055 HLTFQ14527 1009 aaKnown RBP eCLIP19.94■□□□□ 0.78
KRCC1-201ENST00000347055 ANKRD20A8PQ5CZ79 823 aa19.94■□□□□ 0.78
KRCC1-201ENST00000347055 HYIQ5T013 277 aa19.94■□□□□ 0.78
KRCC1-201ENST00000347055 CACNA2D3Q8IZS8 1091 aa19.94■□□□□ 0.78
KRCC1-201ENST00000347055 SYCE1Q8N0S2 351 aa19.94■□□□□ 0.78
KRCC1-201ENST00000347055 TMEM47Q9BQJ4 181 aa19.94■□□□□ 0.78
KRCC1-201ENST00000347055 JPH2Q9BR39 696 aaPredicted RBP19.94■□□□□ 0.78
KRCC1-201ENST00000347055 MKNK2Q9HBH9 465 aa19.94■□□□□ 0.78
KRCC1-201ENST00000347055 TTC7AQ9ULT0 858 aaPredicted RBP19.94■□□□□ 0.78
KRCC1-201ENST00000347055 DIS3Q9Y2L1 958 aaKnown RBP19.94■□□□□ 0.78
KRCC1-201ENST00000347055 BAZ2BQ9UIF8 2168 aaKnown RBP19.94■□□□□ 0.78
KRCC1-201ENST00000347055 COL14A1Q05707 1796 aaKnown RBP19.94■□□□□ 0.78
KRCC1-201ENST00000347055 HIBADHP31937 336 aaKnown RBP19.93■□□□□ 0.78
KRCC1-201ENST00000347055 POLR2FP61218 127 aaKnown RBP19.93■□□□□ 0.78
KRCC1-201ENST00000347055 EDRF1Q3B7T1 1238 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 PPP1R18Q6NYC8 613 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 CROCCP2Q86T23 111 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 PARP9Q8IXQ6 854 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 ZNF444Q8N0Y2 327 aaPredicted RBP19.93■□□□□ 0.78
KRCC1-201ENST00000347055 DDX12PQ92771 950 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 TATDN2Q93075 761 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 HPS3Q969F9 1004 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 GANQ9H2C0 597 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 BMP2KQ9NSY1 1161 aaPredicted RBP19.93■□□□□ 0.78
KRCC1-201ENST00000347055 FBXL5Q9UKA1 691 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.93■□□□□ 0.78
KRCC1-201ENST00000347055 GFPT2O94808 682 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 PRKCIP41743 596 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 GSTO1P78417 241 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 UAP1Q16222 522 aaPredicted RBP19.93■□□□□ 0.78
KRCC1-201ENST00000347055 GKAP1Q5VSY0 366 aaPredicted RBP19.93■□□□□ 0.78
KRCC1-201ENST00000347055 LRRC57Q8N9N7 239 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 NAP1L4Q99733 375 aaKnown RBP19.93■□□□□ 0.78
KRCC1-201ENST00000347055 NT5C3AQ9H0P0 336 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 NLRC4Q9NPP4 1024 aa19.93■□□□□ 0.78
KRCC1-201ENST00000347055 ZNF831Q5JPB2 1677 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 A0A087X0T9 212 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 GSTA1P08263 222 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 FAM228BP0C875 321 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 NF2P35240 595 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 CRKLP46109 303 aaKnown RBP19.92■□□□□ 0.78
KRCC1-201ENST00000347055 MRPL12P52815 198 aaKnown RBP19.92■□□□□ 0.78
KRCC1-201ENST00000347055 PPP4CP60510 307 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 COASYQ13057 564 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 FAM26FQ5R3K3 315 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 CYB5D1Q6P9G0 228 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 SLFN11Q7Z7L1 901 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 FUKQ8N0W3 1084 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 SEC16BQ96JE7 1060 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 SUCLA2Q9P2R7 463 aaPredicted RBP19.92■□□□□ 0.78
KRCC1-201ENST00000347055 CEP83Q9Y592 693 aa19.92■□□□□ 0.78
KRCC1-201ENST00000347055 TRAF5O00463 557 aa19.91■□□□□ 0.78
KRCC1-201ENST00000347055 KCNK3O14649 394 aa19.91■□□□□ 0.78
KRCC1-201ENST00000347055 USP17L8P0C7I0 530 aa19.91■□□□□ 0.78
KRCC1-201ENST00000347055 ZBTB48P10074 688 aaPredicted RBP19.91■□□□□ 0.78
KRCC1-201ENST00000347055 TXKP42681 527 aa19.91■□□□□ 0.78
KRCC1-201ENST00000347055 EVX2Q03828 476 aa19.91■□□□□ 0.78
KRCC1-201ENST00000347055 RAPGEF1Q13905 1077 aa19.91■□□□□ 0.78
KRCC1-201ENST00000347055 SLC10A5Q5PT55 438 aa19.91■□□□□ 0.78
KRCC1-201ENST00000347055 HOOK3Q86VS8 718 aa19.91■□□□□ 0.78
KRCC1-201ENST00000347055 CCDC65Q8IXS2 484 aa19.91■□□□□ 0.78
KRCC1-201ENST00000347055 SNX29Q8TEQ0 813 aa19.91■□□□□ 0.78
KRCC1-201ENST00000347055 DNAJC19Q96DA6 116 aa19.91■□□□□ 0.78
KRCC1-201ENST00000347055 PPANQ9NQ55 473 aaKnown RBP19.91■□□□□ 0.78
KRCC1-201ENST00000347055 FLOT1O75955 427 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 ELF1P32519 619 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 HPDP32754 393 aaPredicted RBP19.9■□□□□ 0.78
KRCC1-201ENST00000347055 NOVP48745 357 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 DZIP1Q86YF9 867 aaKnown RBP19.9■□□□□ 0.78
KRCC1-201ENST00000347055 KLHL7Q8IXQ5 586 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 NENFQ9UMX5 172 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 DDX60LQ5H9U9 1706 aaKnown RBP19.9■□□□□ 0.78
KRCC1-201ENST00000347055 SART1O43290 800 aaKnown RBP19.9■□□□□ 0.78
KRCC1-201ENST00000347055 BAG3O95817 575 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 EZRP15311 586 aaKnown RBP19.9■□□□□ 0.78
KRCC1-201ENST00000347055 DYMQ7RTS9 669 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 TMC4Q7Z404 712 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 TMC3Q7Z5M5 1100 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 VPS36Q86VN1 386 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 TLCD1Q96CP7 247 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.9■□□□□ 0.78
KRCC1-201ENST00000347055 OSBPL7Q9BZF2 842 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 NHSQ6T4R5 1651 aa19.9■□□□□ 0.78
KRCC1-201ENST00000347055 GCFC2P16383 781 aaKnown RBP19.89■□□□□ 0.77
KRCC1-201ENST00000347055 NEDD1Q8NHV4 660 aa19.89■□□□□ 0.77
KRCC1-201ENST00000347055 PSMD1Q99460 953 aa19.89■□□□□ 0.77
KRCC1-201ENST00000347055 RAB17Q9H0T7 212 aa19.89■□□□□ 0.77
KRCC1-201ENST00000347055 RIOX1Q9H6W3 641 aa19.89■□□□□ 0.77
KRCC1-201ENST00000347055 ATP6V0A4Q9HBG4 840 aa19.89■□□□□ 0.77
KRCC1-201ENST00000347055 PANK4Q9NVE7 773 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms