RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 LOC102724159A0A0B4J2E5 919 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 BECN2A8MW95 431 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 FAM155AB1AL88 458 aaPredicted RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 SLC10A3P09131 477 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 FCER1AP12319 257 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 KCNA2P16389 499 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 ERCC5P28715 1186 aaPredicted RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 CCNA1P78396 465 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 EHHADHQ08426 723 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 DHX8Q14562 1220 aaKnown RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 PWP2Q15269 919 aaKnown RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 ARSHQ5FYA8 562 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 POTEGQ6S5H5 508 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 UNC13DQ70J99 1090 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 ANKRD13CQ8N6S4 541 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 ENOX1Q8TC92 643 aaKnown RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 MORC4Q8TE76 937 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 SMCR8Q8TEV9 937 aaPredicted RBP12.28□□□□□ -0.44
ECM1-201ENST00000346569 DDX12PQ92771 950 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 CDHR1Q96JP9 859 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 MMP19Q99542 508 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 HSD3B7Q9H2F3 369 aa12.28□□□□□ -0.44
ECM1-201ENST00000346569 LCTP09848 1927 aa12.27□□□□□ -0.44
ECM1-201ENST00000346569 IGF2BP3O00425 579 aaKnown RBP eCLIP12.27□□□□□ -0.45
ECM1-201ENST00000346569 STRNO43815 780 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 LYPLA2O95372 231 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 EYA4O95677 639 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 PGK2P07205 417 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 P4HBP07237 508 aaKnown RBP12.27□□□□□ -0.45
ECM1-201ENST00000346569 CYP11B2P19099 503 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 SP2Q02086 613 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 CTTNQ14247 550 aaKnown RBP12.27□□□□□ -0.45
ECM1-201ENST00000346569 KCTD2Q14681 263 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 COBLL1Q53SF7 1204 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 MIER3Q7Z3K6 550 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 TPH2Q8IWU9 490 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 ABRAQ8N0Z2 381 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 GIMAP8Q8ND71 665 aaPredicted RBP12.27□□□□□ -0.45
ECM1-201ENST00000346569 NEK9Q8TD19 979 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 HHIPL1Q96JK4 782 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 PARK7Q99497 189 aaKnown RBP12.27□□□□□ -0.45
ECM1-201ENST00000346569 GTPBP4Q9BZE4 634 aaKnown RBP12.27□□□□□ -0.45
ECM1-201ENST00000346569 BCAS3Q9H6U6 928 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 WRAP73Q9P2S5 460 aaPredicted RBP12.27□□□□□ -0.45
ECM1-201ENST00000346569 DACH1Q9UI36 760 aa12.27□□□□□ -0.45
ECM1-201ENST00000346569 ADGRA2Q96PE1 1338 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 B4DLN1 442 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 GOLGA6L19H0YKK7 550 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 ZBTB39O15060 712 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 CHMP2AO43633 222 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 CCNE2O96020 404 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 TGFB3P10600 412 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 PRCPP42785 496 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 ASIC1P78348 528 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 KRT76Q01546 638 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 CYP4A11Q02928 519 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 FAM110CQ1W6H9 321 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 ZNF792Q3KQV3 632 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 GNPTABQ3T906 1256 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 ZNF746Q6NUN9 644 aaPredicted RBP12.26□□□□□ -0.45
ECM1-201ENST00000346569 SARM1Q6SZW1 724 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 SMYD4Q8IYR2 804 aaPredicted RBP12.26□□□□□ -0.45
ECM1-201ENST00000346569 ADSSL1Q8N142 457 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 RDM1Q8NG50 284 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 CCDC102AQ96A19 550 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 NACC1Q96RE7 527 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 PKD2L1Q9P0L9 805 aa12.26□□□□□ -0.45
ECM1-201ENST00000346569 FRMD3A2A2Y4 597 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 DDX39AO00148 427 aaKnown RBP12.25□□□□□ -0.45
ECM1-201ENST00000346569 COBLO75128 1261 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 ATG7O95352 703 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 ADCY5O95622 1261 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 SFNP31947 248 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 JAK3P52333 1124 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 MYL5Q02045 173 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 PDE4DQ08499 809 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 CCDC173Q0VFZ6 552 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 STK4Q13043 487 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 PSMD2Q13200 908 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 GIT2Q14161 759 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 DYMQ7RTS9 669 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 PIGOQ8TEQ8 1089 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 ANP32BQ92688 251 aaKnown RBP12.25□□□□□ -0.45
ECM1-201ENST00000346569 BMP2KQ9NSY1 1161 aaPredicted RBP12.25□□□□□ -0.45
ECM1-201ENST00000346569 GDAQ9Y2T3 454 aa12.25□□□□□ -0.45
ECM1-201ENST00000346569 TMEM88BA6NKF7 163 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 WDR64B1ANS9 1081 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 QARSP47897 775 aaKnown RBP12.24□□□□□ -0.45
ECM1-201ENST00000346569 TM4SF4P48230 202 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 RINT1Q6NUQ1 792 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 C17orf99Q6UX52 265 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 ABHD15Q6UXT9 468 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 C1orf186Q6ZWK4 172 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 GPBP1Q86WP2 473 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 IFNL1Q8IU54 200 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 C4orf19Q8IY42 314 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 CCDC47Q96A33 483 aaKnown RBP12.24□□□□□ -0.45
ECM1-201ENST00000346569 LXNQ9BS40 222 aa12.24□□□□□ -0.45
ECM1-201ENST00000346569 BHMT2Q9H2M3 363 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms