RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 AP3B2Q13367 1082 aa18.34■□□□□ 0.53
RAB5C-201ENST00000346213 NEDD9Q14511 834 aa18.34■□□□□ 0.53
RAB5C-201ENST00000346213 CEP55Q53EZ4 464 aa18.34■□□□□ 0.53
RAB5C-201ENST00000346213 UTP14CQ5TAP6 766 aaKnown RBP18.34■□□□□ 0.53
RAB5C-201ENST00000346213 NLRX1Q86UT6 975 aa18.34■□□□□ 0.53
RAB5C-201ENST00000346213 TTYH1Q9H313 450 aaPredicted RBP18.34■□□□□ 0.53
RAB5C-201ENST00000346213 H3BRB1 525 aa18.33■□□□□ 0.52
RAB5C-201ENST00000346213 DHX15O43143 795 aaKnown RBP18.33■□□□□ 0.52
RAB5C-201ENST00000346213 IQCF3P0C7M6 154 aa18.33■□□□□ 0.52
RAB5C-201ENST00000346213 TCF7P36402 384 aaPredicted RBP18.33■□□□□ 0.52
RAB5C-201ENST00000346213 PBX2P40425 430 aa18.33■□□□□ 0.52
RAB5C-201ENST00000346213 OTOP2Q7RTS6 562 aa18.33■□□□□ 0.52
RAB5C-201ENST00000346213 DEFB128Q7Z7B8 93 aa18.33■□□□□ 0.52
RAB5C-201ENST00000346213 TMEM199Q8N511 208 aa18.33■□□□□ 0.52
RAB5C-201ENST00000346213 GJA10Q969M2 543 aa18.33■□□□□ 0.52
RAB5C-201ENST00000346213 SEZ6LQ9BYH1 1024 aa18.33■□□□□ 0.52
RAB5C-201ENST00000346213 TUT1Q9H6E5 874 aaKnown RBP18.33■□□□□ 0.52
RAB5C-201ENST00000346213 KCNJ14Q9UNX9 436 aa18.33■□□□□ 0.52
RAB5C-201ENST00000346213 TREHO43280 583 aa18.32■□□□□ 0.52
RAB5C-201ENST00000346213 ADAM17P78536 824 aa18.32■□□□□ 0.52
RAB5C-201ENST00000346213 PPIGQ13427 754 aaKnown RBP eCLIP18.32■□□□□ 0.526e-7■□□□□ 9
RAB5C-201ENST00000346213 REXO1Q8N1G1 1221 aaKnown RBP18.32■□□□□ 0.52
RAB5C-201ENST00000346213 C7orf31Q8N865 590 aa18.32■□□□□ 0.52
RAB5C-201ENST00000346213 FAM161BQ96MY7 647 aa18.32■□□□□ 0.52
RAB5C-201ENST00000346213 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
RAB5C-201ENST00000346213 JAK2O60674 1132 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 NBNO60934 754 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 FOSP01100 380 aaPredicted RBP18.31■□□□□ 0.52
RAB5C-201ENST00000346213 CYP3A4P08684 503 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 MARK3P27448 753 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 SSRP1Q08945 709 aaKnown RBP18.31■□□□□ 0.52
RAB5C-201ENST00000346213 RBL2Q08999 1139 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 TET1Q8NFU7 2136 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 GUCD1Q96NT3 240 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 NOP56O00567 594 aaKnown RBP18.31■□□□□ 0.52
RAB5C-201ENST00000346213 SUPT20HL2P0C7V6 817 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 CKBP12277 381 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 EARS2Q5JPH6 523 aaKnown RBP18.31■□□□□ 0.52
RAB5C-201ENST00000346213 DEFB123Q8N688 67 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 OXER1Q8TDS5 423 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 TMX3Q96JJ7 454 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 C6orf50Q9HD87 102 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 MTMR10Q9NXD2 777 aa18.31■□□□□ 0.52
RAB5C-201ENST00000346213 PRUNE2Q8WUY3 3088 aa18.3■□□□□ 0.52
RAB5C-201ENST00000346213 TRIP12Q14669 1992 aaPredicted RBP18.3■□□□□ 0.52
RAB5C-201ENST00000346213 FAM205CA6NFA0 338 aa18.3■□□□□ 0.52
RAB5C-201ENST00000346213 DDX39AO00148 427 aaKnown RBP18.3■□□□□ 0.52
RAB5C-201ENST00000346213 PITPNM1O00562 1244 aa18.3■□□□□ 0.52
RAB5C-201ENST00000346213 CUL4AQ13619 759 aa18.3■□□□□ 0.52
RAB5C-201ENST00000346213 ZNF618Q5T7W0 954 aa18.3■□□□□ 0.52
RAB5C-201ENST00000346213 RUFY4Q6ZNE9 571 aa18.3■□□□□ 0.52
RAB5C-201ENST00000346213 SERINC5Q86VE9 423 aa18.3■□□□□ 0.52
RAB5C-201ENST00000346213 LMBR1Q8WVP7 490 aa18.3■□□□□ 0.52
RAB5C-201ENST00000346213 HERVK_113Q902F9 699 aa18.3■□□□□ 0.52
RAB5C-201ENST00000346213 GTF3C6Q969F1 213 aa18.3■□□□□ 0.52
RAB5C-201ENST00000346213 KATNAL1Q9BW62 490 aa18.3■□□□□ 0.52
RAB5C-201ENST00000346213 LGR5O75473 907 aa18.29■□□□□ 0.52
RAB5C-201ENST00000346213 DEXIO95424 95 aa18.29■□□□□ 0.52
RAB5C-201ENST00000346213 ACTR2P61160 394 aa18.29■□□□□ 0.52
RAB5C-201ENST00000346213 MARCH8Q5T0T0 291 aa18.29■□□□□ 0.52
RAB5C-201ENST00000346213 PLA2G4DQ86XP0 818 aa18.29■□□□□ 0.52
RAB5C-201ENST00000346213 NSUN7Q8NE18 718 aaKnown RBP18.29■□□□□ 0.52
RAB5C-201ENST00000346213 JPH1Q9HDC5 661 aaPredicted RBP18.29■□□□□ 0.52
RAB5C-201ENST00000346213 FOXD4L1Q9NU39 408 aa18.29■□□□□ 0.52
RAB5C-201ENST00000346213 REV3LO60673 3130 aa18.29■□□□□ 0.52
RAB5C-201ENST00000346213 PTPRSQ13332 1948 aa18.29■□□□□ 0.52
RAB5C-201ENST00000346213 ARHGEF15O94989 841 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 CIITAP33076 1130 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 SMAD3P84022 425 aaKnown RBP18.28■□□□□ 0.52
RAB5C-201ENST00000346213 PSRC1Q6PGN9 363 aaPredicted RBP18.28■□□□□ 0.52
RAB5C-201ENST00000346213 TMCO2Q7Z6W1 182 aaPredicted RBP18.28■□□□□ 0.52
RAB5C-201ENST00000346213 PHF20Q9BVI0 1012 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 SH3GLB2Q9NR46 395 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 SLC9A2Q9UBY0 812 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 PCDHA4Q9UN74 947 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 YBX2Q9Y2T7 364 aaKnown RBP18.28■□□□□ 0.52
RAB5C-201ENST00000346213 NFASCO94856 1347 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 C17orf102A2RUQ5 167 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 CPLX1O14810 134 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 TDP2O95551 362 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 MYOGP15173 224 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 NLRP5P59047 1200 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 AKAP17AQ02040 695 aaKnown RBP18.28■□□□□ 0.52
RAB5C-201ENST00000346213 PTK7Q13308 1070 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 LRRC8DQ7L1W4 858 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 TEX2Q8IWB9 1127 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 DAGLBQ8NCG7 672 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 TRAPPC12Q8WVT3 735 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 SEPT1Q8WYJ6 367 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 CDHR1Q96JP9 859 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 PBX4Q9BYU1 374 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 NOD1Q9Y239 953 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 STK36Q9NRP7 1315 aa18.28■□□□□ 0.52
RAB5C-201ENST00000346213 SIP14410 1827 aa18.27■□□□□ 0.52
RAB5C-201ENST00000346213 WNT7AO00755 349 aa18.27■□□□□ 0.52
RAB5C-201ENST00000346213 ATG7O95352 703 aa18.27■□□□□ 0.52
RAB5C-201ENST00000346213 FGBP02675 491 aa18.27■□□□□ 0.52
RAB5C-201ENST00000346213 ATP4AP20648 1035 aa18.27■□□□□ 0.52
RAB5C-201ENST00000346213 RABGGTBP53611 331 aa18.27■□□□□ 0.52
RAB5C-201ENST00000346213 GPR153Q6NV75 609 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms