RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 LAMB3Q13751 1172 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 LRRC24Q50LG9 513 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 NUDCD3Q8IVD9 361 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 PNMA1Q8ND90 353 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 ZIM3Q96PE6 472 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 LZTS1Q9Y250 596 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 PAX7P23759 505 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 EPHB1P54762 984 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 IL1RL1Q01638 556 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 FAM178BQ8IXR5 827 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 GRAMD1AQ96CP6 724 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 EIF2AQ9BY44 585 aaKnown RBP13.05□□□□□ -0.32
COL12A1-202ENST00000345356 DDX25Q9UHL0 483 aaKnown RBP13.05□□□□□ -0.32
COL12A1-202ENST00000345356 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 PDE8AO60658 829 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 INPP1P49441 399 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 CRLF3Q8IUI8 442 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 XPO6Q96QU8 1125 aaKnown RBP13.05□□□□□ -0.32
COL12A1-202ENST00000345356 LBHD1Q9BQE6 289 aaPredicted RBP13.05□□□□□ -0.32
COL12A1-202ENST00000345356 LCMT1Q9UIC8 334 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 TRPC5Q9UL62 973 aaPredicted RBP13.05□□□□□ -0.32
COL12A1-202ENST00000345356 KIAA1024Q9UPX6 916 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 DIS3Q9Y2L1 958 aaKnown RBP13.05□□□□□ -0.32
COL12A1-202ENST00000345356 SYNMO15061 1565 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 IL17REQ8NFR9 667 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 ATP8A2Q9NTI2 1148 aa13.05□□□□□ -0.32
COL12A1-202ENST00000345356 USP15Q9Y4E8 981 aaPredicted RBP13.05□□□□□ -0.32
COL12A1-202ENST00000345356 H7C0C1 242 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 KDM1AO60341 852 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 SKAP2O75563 359 aaPredicted RBP13.04□□□□□ -0.32
COL12A1-202ENST00000345356 ATP5OP48047 213 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 RASSF3Q86WH2 238 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 SUGP1Q8IWZ8 645 aaKnown RBP13.04□□□□□ -0.32
COL12A1-202ENST00000345356 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL12A1-202ENST00000345356 ANKRD2Q9GZV1 360 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 GSTA1P08263 222 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 GSTA2P09210 222 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 SERPINB3P29508 390 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 TMPRSS15P98073 1019 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 MKRN3Q13064 507 aaKnown RBP13.04□□□□□ -0.32
COL12A1-202ENST00000345356 BYSLQ13895 437 aaKnown RBP13.04□□□□□ -0.32
COL12A1-202ENST00000345356 LRIG3Q6UXM1 1119 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 TRMT10CQ7L0Y3 403 aaKnown RBP13.04□□□□□ -0.32
COL12A1-202ENST00000345356 SESTD1Q86VW0 696 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 SAYSD1Q9NPB0 183 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 CHCHD3Q9NX63 227 aaKnown RBP13.04□□□□□ -0.32
COL12A1-202ENST00000345356 PCDHA4Q9UN74 947 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 MYOM2P54296 1465 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 FOXN1O15353 648 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 PLCG1P19174 1290 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 ARFIP2P53365 341 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
COL12A1-202ENST00000345356 RAD9BQ6WBX8 426 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 TC2NQ8N9U0 490 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 CCDC127Q96BQ5 260 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 VCPKMTQ9H867 229 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 GOLGA8HP0CJ92 632 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 HIBADHP31937 336 aaKnown RBP13.04□□□□□ -0.32
COL12A1-202ENST00000345356 HSPA9P38646 679 aaKnown RBP13.04□□□□□ -0.32
COL12A1-202ENST00000345356 PSMC1P62191 440 aaKnown RBP13.04□□□□□ -0.32
COL12A1-202ENST00000345356 NR1H3Q13133 447 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 USH1GQ495M9 461 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 SCYL2Q6P3W7 929 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 AGGF1Q8N302 714 aaeCLIP13.04□□□□□ -0.32
COL12A1-202ENST00000345356 SETDB2Q96T68 719 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 TTLL3Q9Y4R7 772 aa13.04□□□□□ -0.32
COL12A1-202ENST00000345356 CNGA1P29973 690 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 TMEM259Q4ZIN3 620 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 PRPF31Q8WWY3 499 aaKnown RBP13.03□□□□□ -0.32
COL12A1-202ENST00000345356 SMYD2Q9NRG4 433 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 NUB1Q9Y5A7 615 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 IQANK1A0A1B0GTG1 560 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 K7ENM7 598 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 IGF2BP3O00425 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL12A1-202ENST00000345356 PRCPP42785 496 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 BBS9Q3SYG4 887 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 CENPUQ71F23 418 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 FAM186BQ8IYM0 893 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
COL12A1-202ENST00000345356 OR2W6PQ8NHA6 318 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 SLC26A7Q8TE54 656 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 SNRNP27Q8WVK2 155 aaKnown RBP13.03□□□□□ -0.32
COL12A1-202ENST00000345356 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 TRIM10Q9UDY6 481 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 TSC22D4Q9Y3Q8 395 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 NCOA3Q9Y6Q9 1424 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 KLRF2D3W0D1 207 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 ERFP50548 548 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 PYROXD1Q8WU10 500 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 CHP1Q99653 195 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 GINM1Q9NU53 330 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 NOC2LQ9Y3T9 749 aaKnown RBP13.03□□□□□ -0.32
COL12A1-202ENST00000345356 ANP32DO95626 131 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 PSMC2P35998 433 aaKnown RBP13.03□□□□□ -0.32
COL12A1-202ENST00000345356 STAT2P52630 851 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 MFAP3P55082 362 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 BASP1P80723 227 aaKnown RBP13.03□□□□□ -0.32
COL12A1-202ENST00000345356 LRRC63Q05C16 580 aa13.03□□□□□ -0.32
COL12A1-202ENST00000345356 ACBD5Q5T8D3 534 aaPredicted RBP13.03□□□□□ -0.32
COL12A1-202ENST00000345356 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms