RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CERS4Q9HA82 394 aa14.24□□□□□ -0.13
SGCA-202ENST00000344627 NRCAMQ92823 1304 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 KLF18A0A0U1RQI7 1052 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 LINC01553A4QN01 128 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 GOLGA8AA7E2F4 631 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 GOLGA8BA8MQT2 603 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 RFXAPO00287 272 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 NCK2O43639 380 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 LPXNO60711 386 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 LGALS2P05162 132 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 HMGB1P09429 215 aaKnown RBP14.23□□□□□ -0.13
SGCA-202ENST00000344627 THPOP40225 353 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 NAPAP54920 295 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 DEFB103AP81534 67 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 EXOSC10Q01780 885 aaKnown RBP14.23□□□□□ -0.13
SGCA-202ENST00000344627 SEMA3FQ13275 785 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
SGCA-202ENST00000344627 SUGCTQ9HAC7 445 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 PKD2L1Q9P0L9 805 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 BRPF3Q9ULD4 1205 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 PCDHA6Q9UN73 950 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 PCDHA8Q9Y5H6 950 aa14.23□□□□□ -0.13
SGCA-202ENST00000344627 V9GY48 417 aaPredicted RBP14.23□□□□□ -0.13
SGCA-202ENST00000344627 XIRP2A4UGR9 3374 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 EPOPA6NHQ4 379 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 SMIM10L2AP0DMW4 78 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 SMIM10L2BP0DMW5 78 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 CPA1P15085 419 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 MKRN4PQ13434 485 aaPredicted RBP14.22□□□□□ -0.13
SGCA-202ENST00000344627 FAM26DQ5JW98 314 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 TAF2Q6P1X5 1199 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 RSPH3Q86UC2 560 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 DBF4BQ8NFT6 615 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 TOP1MTQ969P6 601 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 JAKMIP1Q96N16 626 aaKnown RBP14.22□□□□□ -0.13
SGCA-202ENST00000344627 GPR20Q99678 358 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 FAM50BQ9Y247 325 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 RWDD3Q9Y3V2 267 aa14.22□□□□□ -0.13
SGCA-202ENST00000344627 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.21□□□□□ -0.13
SGCA-202ENST00000344627 TFF2Q03403 129 aa14.21□□□□□ -0.13
SGCA-202ENST00000344627 TSGA10IPQ3SY00 556 aa14.21□□□□□ -0.13
SGCA-202ENST00000344627 TIGD5Q53EQ6 642 aa14.21□□□□□ -0.13
SGCA-202ENST00000344627 WWC2Q6AWC2 1192 aa14.21□□□□□ -0.13
SGCA-202ENST00000344627 TRIM50Q86XT4 487 aa14.21□□□□□ -0.13
SGCA-202ENST00000344627 FBXO22Q8NEZ5 403 aa14.21□□□□□ -0.13
SGCA-202ENST00000344627 GPRASP2Q96D09 838 aa14.21□□□□□ -0.13
SGCA-202ENST00000344627 RNPEPQ9H4A4 650 aa14.21□□□□□ -0.13
SGCA-202ENST00000344627 COL4A6Q14031 1691 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 CNTNAP5Q8WYK1 1306 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 LCHNA4D1U4 455 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 TREHO43280 583 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 RB1P06400 928 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 METAP2P50579 478 aaKnown RBP eCLIP14.2□□□□□ -0.14
SGCA-202ENST00000344627 KCNQ1P51787 676 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 ADCY7P51828 1080 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 APOBRQ0VD83 1088 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 MTMR1Q13613 665 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 HIC1Q14526 733 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 MBTPS1Q14703 1052 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 LEXMQ3ZCV2 418 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 BLOC1S2Q6QNY1 142 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 Q6ZUG5 572 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 MYOCDQ8IZQ8 938 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 WNT8BQ93098 351 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 MRPL38Q96DV4 380 aaKnown RBP14.2□□□□□ -0.14
SGCA-202ENST00000344627 PGBD1Q96JS3 809 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 YME1L1Q96TA2 773 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 SETD4Q9NVD3 440 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 TELO2Q9Y4R8 837 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 TRANK1O15050 2925 aa14.2□□□□□ -0.14
SGCA-202ENST00000344627 SMCO2A6NFE2 343 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 ATP9AO75110 1047 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 ARHGEF15O94989 841 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 REC8O95072 547 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 MARK3P27448 753 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 TCF7P36402 384 aaPredicted RBP14.19□□□□□ -0.14
SGCA-202ENST00000344627 ZNF76P36508 570 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 ADAM17P78536 824 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 ARHGAP4P98171 946 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 FAM117BQ6P1L5 589 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 GLG1Q92896 1179 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 LMAN2LQ9H0V9 348 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 UBE2ZQ9H832 354 aaPredicted RBP14.19□□□□□ -0.14
SGCA-202ENST00000344627 RIC8AQ9NPQ8 531 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 JADE2Q9NQC1 790 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 ERAP1Q9NZ08 941 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 HCN4Q9Y3Q4 1203 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 SNX14Q9Y5W7 946 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 SQORQ9Y6N5 450 aa14.19□□□□□ -0.14
SGCA-202ENST00000344627 CCDC196A0A1B0GTZ2 297 aa14.18□□□□□ -0.14
SGCA-202ENST00000344627 RRN3P2A6NIE6 340 aa14.18□□□□□ -0.14
SGCA-202ENST00000344627 H3BNC9 293 aa14.18□□□□□ -0.14
SGCA-202ENST00000344627 CTSHP09668 335 aa14.18□□□□□ -0.14
SGCA-202ENST00000344627 KCNA2P16389 499 aa14.18□□□□□ -0.14
SGCA-202ENST00000344627 ITGB5P18084 799 aa14.18□□□□□ -0.14
SGCA-202ENST00000344627 CDC27P30260 824 aa14.18□□□□□ -0.14
SGCA-202ENST00000344627 ADD1P35611 737 aaKnown RBP14.18□□□□□ -0.14
SGCA-202ENST00000344627 AKAP17AQ02040 695 aaKnown RBP14.18□□□□□ -0.14
SGCA-202ENST00000344627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.18□□□□□ -0.14
SGCA-202ENST00000344627 TMCO2Q7Z6W1 182 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms