RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 PPP4R3AQ6IN85 833 aa26.45■■□□□ 1.82
NELFB-201ENST00000343053 ZNF572Q7Z3I7 529 aaPredicted RBP26.45■■□□□ 1.82
NELFB-201ENST00000343053 ZIM3Q96PE6 472 aa26.45■■□□□ 1.82
NELFB-201ENST00000343053 TSPYL1Q9H0U9 437 aa26.45■■□□□ 1.82
NELFB-201ENST00000343053 ABCB11O95342 1321 aa26.45■■□□□ 1.82
NELFB-201ENST00000343053 SSU72P8A0A1W2PR75 194 aa26.44■■□□□ 1.82
NELFB-201ENST00000343053 CLK2P49760 499 aaKnown RBP26.44■■□□□ 1.82
NELFB-201ENST00000343053 IRAK1P51617 712 aa26.44■■□□□ 1.82
NELFB-201ENST00000343053 KLHL7Q8IXQ5 586 aa26.44■■□□□ 1.82
NELFB-201ENST00000343053 CERS5Q8N5B7 392 aa26.44■■□□□ 1.82
NELFB-201ENST00000343053 MYH4Q9Y623 1939 aa26.44■■□□□ 1.82
NELFB-201ENST00000343053 RGL2O15211 777 aa26.44■■□□□ 1.82
NELFB-201ENST00000343053 PSMC6P62333 389 aa26.44■■□□□ 1.82
NELFB-201ENST00000343053 PROM2Q8N271 834 aa26.44■■□□□ 1.82
NELFB-201ENST00000343053 CCDC43Q96MW1 224 aaKnown RBP26.44■■□□□ 1.82
NELFB-201ENST00000343053 EMILIN3Q9NT22 766 aa26.44■■□□□ 1.82
NELFB-201ENST00000343053 ADAMTSL1Q8N6G6 1762 aa26.44■■□□□ 1.82
NELFB-201ENST00000343053 hCG_1984214I3L0E3 225 aa26.43■■□□□ 1.82
NELFB-201ENST00000343053 SLC9A1P19634 815 aa26.43■■□□□ 1.82
NELFB-201ENST00000343053 DOK7Q18PE1 504 aa26.43■■□□□ 1.82
NELFB-201ENST00000343053 TRIM59Q8IWR1 403 aa26.43■■□□□ 1.82
NELFB-201ENST00000343053 ZNF713Q8N859 430 aaPredicted RBP26.43■■□□□ 1.82
NELFB-201ENST00000343053 LRRC4BQ9NT99 713 aa26.43■■□□□ 1.82
NELFB-201ENST00000343053 USP40Q9NVE5 1235 aa26.43■■□□□ 1.82
NELFB-201ENST00000343053 CYP11B2P19099 503 aa26.43■■□□□ 1.82
NELFB-201ENST00000343053 SHMT1P34896 483 aa26.43■■□□□ 1.82
NELFB-201ENST00000343053 MRPL12P52815 198 aaKnown RBP26.43■■□□□ 1.82
NELFB-201ENST00000343053 NFIAQ12857 509 aa26.43■■□□□ 1.82
NELFB-201ENST00000343053 PABPC4Q13310 644 aaKnown RBP eCLIP26.43■■□□□ 1.822e-6■■■□□ 18.9
NELFB-201ENST00000343053 CCDC65Q8IXS2 484 aa26.43■■□□□ 1.82
NELFB-201ENST00000343053 CAPS2Q9BXY5 557 aa26.43■■□□□ 1.82
NELFB-201ENST00000343053 ZBTB5O15062 677 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 HSF2BPO75031 334 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 SERPINB2P05120 415 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 NR2F2P24468 414 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 SLC30A10Q6XR72 485 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 ZFPM1Q8IX07 1006 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 SLF2Q8IX21 1173 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 PCDHA2Q9Y5H9 948 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 TCP10Q12799 353 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 KCNH2Q12809 1159 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 PDCLQ13371 301 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 DCAF17Q5H9S7 520 aaPredicted RBP26.42■■□□□ 1.82
NELFB-201ENST00000343053 C15orf52Q6ZUT6 534 aaKnown RBP26.42■■□□□ 1.82
NELFB-201ENST00000343053 LRRC27Q9C0I9 530 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 SAMM50Q9Y512 469 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 PCDHAC2Q9Y5I4 1007 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 IKZF4Q9H2S9 585 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 KCTD10Q9H3F6 313 aa26.42■■□□□ 1.82
NELFB-201ENST00000343053 IGKV6D-41A0A0C4DH26 115 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 ITIH3Q06033 890 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 ASIC2Q16515 512 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 SLC18A3Q16572 532 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 QRICH1Q2TAL8 776 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 ARSHQ5FYA8 562 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 CERS3Q8IU89 383 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 BCAS4Q8TDM0 211 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 FAM163AQ96GL9 167 aaPredicted RBP26.41■■□□□ 1.82
NELFB-201ENST00000343053 GRID2IPA4D2P6 1211 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 CYP4A11Q02928 519 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 NAB2Q15742 525 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 PRR16Q569H4 304 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 RBM17Q96I25 401 aaKnown RBP26.41■■□□□ 1.82
NELFB-201ENST00000343053 PCDHA1Q9Y5I3 950 aa26.41■■□□□ 1.82
NELFB-201ENST00000343053 SRCAPQ6ZRS2 3230 aa26.4■■□□□ 1.82
NELFB-201ENST00000343053 PTK2Q05397 1052 aa26.4■■□□□ 1.82
NELFB-201ENST00000343053 USH1GQ495M9 461 aa26.4■■□□□ 1.82
NELFB-201ENST00000343053 TCERG1LQ5VWI1 586 aa26.4■■□□□ 1.82
NELFB-201ENST00000343053 P2RX7Q99572 595 aaKnown RBP26.4■■□□□ 1.82
NELFB-201ENST00000343053 EMBQ6PCB8 327 aa26.4■■□□□ 1.82
NELFB-201ENST00000343053 GRIN2DO15399 1336 aa26.4■■□□□ 1.82
NELFB-201ENST00000343053 TAF1LQ8IZX4 1826 aa26.39■■□□□ 1.82
NELFB-201ENST00000343053 RSPH10B2B2RC85 870 aa26.39■■□□□ 1.82
NELFB-201ENST00000343053 RBAK-RBAKDNI3L0D1 243 aa26.39■■□□□ 1.82
NELFB-201ENST00000343053 KCNK3O14649 394 aa26.39■■□□□ 1.82
NELFB-201ENST00000343053 SHOX2O60902 331 aaPredicted RBP26.39■■□□□ 1.82
NELFB-201ENST00000343053 RSPH10BP0C881 870 aa26.39■■□□□ 1.82
NELFB-201ENST00000343053 RNF10Q8N5U6 811 aaKnown RBP26.39■■□□□ 1.82
NELFB-201ENST00000343053 TBC1D22AQ8WUA7 517 aa26.39■■□□□ 1.82
NELFB-201ENST00000343053 CASKIN2Q8WXE0 1202 aa26.39■■□□□ 1.82
NELFB-201ENST00000343053 ANO3Q9BYT9 981 aa26.39■■□□□ 1.82
NELFB-201ENST00000343053 NT5C3AQ9H0P0 336 aa26.39■■□□□ 1.82
NELFB-201ENST00000343053 HDAC9Q9UKV0 1011 aa26.39■■□□□ 1.82
NELFB-201ENST00000343053 PLIN4Q96Q06 1357 aa26.39■■□□□ 1.82
NELFB-201ENST00000343053 NOP2P46087 812 aaKnown RBP26.39■■□□□ 1.81
NELFB-201ENST00000343053 PPFIA1Q13136 1202 aa26.39■■□□□ 1.81
NELFB-201ENST00000343053 SH3GL2Q99962 352 aa26.39■■□□□ 1.81
NELFB-201ENST00000343053 GANQ9H2C0 597 aa26.39■■□□□ 1.81
NELFB-201ENST00000343053 GJB7Q6PEY0 223 aa26.38■■□□□ 1.81
NELFB-201ENST00000343053 SFR1Q86XK3 245 aa26.38■■□□□ 1.81
NELFB-201ENST00000343053 SPAG5Q96R06 1193 aa26.38■■□□□ 1.81
NELFB-201ENST00000343053 KDM3AQ9Y4C1 1321 aa26.38■■□□□ 1.81
NELFB-201ENST00000343053 ZEB2O60315 1214 aa26.38■■□□□ 1.81
NELFB-201ENST00000343053 MYBP10242 640 aa26.38■■□□□ 1.81
NELFB-201ENST00000343053 GYS1P13807 737 aa26.38■■□□□ 1.81
NELFB-201ENST00000343053 CRY2Q49AN0 593 aa26.38■■□□□ 1.81
NELFB-201ENST00000343053 ZNF571Q7Z3V5 609 aaPredicted RBP26.38■■□□□ 1.81
NELFB-201ENST00000343053 CEP63Q96MT8 703 aa26.38■■□□□ 1.81
NELFB-201ENST00000343053 AJAP1Q9UKB5 411 aaPredicted RBP26.38■■□□□ 1.81
NELFB-201ENST00000343053 GOLGA8KD6RF30 607 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms