RNA–Protein interactions for RNA: ENST00000341509.9

LCTL-201, Transcript of lactase like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCTL, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCTL-201ENST00000341509 TPTE2Q6XPS3 522 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 MAATS1Q7Z4T9 603 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 IFT20Q8IY31 132 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 ARHGEF1Q92888 912 aaKnown RBP13.17□□□□□ -0.3
LCTL-201ENST00000341509 DDX47Q9H0S4 455 aaKnown RBP13.17□□□□□ -0.3
LCTL-201ENST00000341509 STK17AQ9UEE5 414 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 PCDHA2Q9Y5H9 948 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.17□□□□□ -0.3
LCTL-201ENST00000341509 SSU72P8A0A1W2PR75 194 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 SHTN1A0MZ66 631 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 USP17L10C9JJH3 530 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 RBAK-RBAKDNI3L0D1 243 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 MARCH6O60337 910 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 TMOD1P28289 359 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 POLD1P28340 1107 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 COPB2P35606 906 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 PPP4CP60510 307 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 HLTFQ14527 1009 aaKnown RBP eCLIP13.17□□□□□ -0.3
LCTL-201ENST00000341509 SLC18A3Q16572 532 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 TMEM266Q2M3C6 531 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 SPRED3Q2MJR0 410 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 RBM46Q8TBY0 533 aaKnown RBP13.17□□□□□ -0.3
LCTL-201ENST00000341509 COL5A3P25940 1745 aaPredicted RBP13.17□□□□□ -0.3
LCTL-201ENST00000341509 MAST2Q6P0Q8 1798 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 EPB41P11171 864 aaKnown RBP13.17□□□□□ -0.3
LCTL-201ENST00000341509 RFC4P35249 363 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 ADAM9Q13443 819 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 UAP1Q16222 522 aaPredicted RBP13.17□□□□□ -0.3
LCTL-201ENST00000341509 ARSHQ5FYA8 562 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 ALS2CLQ60I27 953 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 PPANQ9NQ55 473 aaKnown RBP13.17□□□□□ -0.3
LCTL-201ENST00000341509 NARFQ9UHQ1 456 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 PCDHA12Q9UN75 941 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 CAPN7Q9Y6W3 813 aa13.17□□□□□ -0.3
LCTL-201ENST00000341509 WNK3Q9BYP7 1800 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 NR1D1P20393 614 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 MFSD14BQ5SR56 506 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 NAA35Q5VZE5 725 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 TRIM59Q8IWR1 403 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 USP38Q8NB14 1042 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 P2RX7Q99572 595 aaKnown RBP13.16□□□□□ -0.3
LCTL-201ENST00000341509 TSG101Q99816 390 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 LZTS2Q9BRK4 669 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 CELF4Q9BZC1 486 aaKnown RBP13.16□□□□□ -0.3
LCTL-201ENST00000341509 KCTD10Q9H3F6 313 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 DDX4Q9NQI0 724 aaKnown RBP13.16□□□□□ -0.3
LCTL-201ENST00000341509 BCS1LQ9Y276 419 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
LCTL-201ENST00000341509 MED24O75448 989 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 HNRNPH1P31943 449 aaKnown RBP13.16□□□□□ -0.3
LCTL-201ENST00000341509 INPP5BP32019 993 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 SKOR1P84550 965 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 ADAT2Q7Z6V5 191 aaKnown RBP13.16□□□□□ -0.3
LCTL-201ENST00000341509 GPBP1Q86WP2 473 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 GANQ9H2C0 597 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 MTMR4Q9NYA4 1195 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 NR2E1Q9Y466 385 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 PCDHGC5Q9Y5F6 944 aa13.16□□□□□ -0.3
LCTL-201ENST00000341509 RSPH10B2B2RC85 870 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 CEP104O60308 925 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 UFL1O94874 794 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 RSPH10BP0C881 870 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 HOXD13P35453 343 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 CASP4P49662 377 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 RNF10Q8N5U6 811 aaKnown RBP13.15□□□□□ -0.3
LCTL-201ENST00000341509 BCCIPQ9P287 314 aaKnown RBP eCLIP13.15□□□□□ -0.3
LCTL-201ENST00000341509 SFI1A8K8P3 1242 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 CPP00450 1065 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 PLA2G4BP0C869 781 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 HSD17B3P37058 310 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 CDC37Q16543 378 aaPredicted RBP13.15□□□□□ -0.3
LCTL-201ENST00000341509 DPY19L2P1Q6NXN4 242 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 IRF2BP2Q7Z5L9 587 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 AMACRQ9UHK6 382 aa13.15□□□□□ -0.3
LCTL-201ENST00000341509 GPR75-ASB3A0A0A6YYF3 556 aa13.15□□□□□ -0.31
LCTL-201ENST00000341509 TMCO5BA8MYB1 307 aa13.15□□□□□ -0.31
LCTL-201ENST00000341509 NR2F2P24468 414 aa13.15□□□□□ -0.31
LCTL-201ENST00000341509 DCAF17Q5H9S7 520 aaPredicted RBP13.15□□□□□ -0.31
LCTL-201ENST00000341509 TRIM31Q9BZY9 425 aa13.15□□□□□ -0.31
LCTL-201ENST00000341509 CLIC2O15247 247 aa13.14□□□□□ -0.31
LCTL-201ENST00000341509 CYP11B2P19099 503 aa13.14□□□□□ -0.31
LCTL-201ENST00000341509 IBSPP21815 317 aaPredicted RBP13.14□□□□□ -0.31
LCTL-201ENST00000341509 TNFRSF8P28908 595 aa13.14□□□□□ -0.31
LCTL-201ENST00000341509 PPP1R2P41236 205 aa13.14□□□□□ -0.31
LCTL-201ENST00000341509 PAK2Q13177 524 aa13.14□□□□□ -0.31
LCTL-201ENST00000341509 PABPC4Q13310 644 aaKnown RBP eCLIP13.14□□□□□ -0.31
LCTL-201ENST00000341509 ITGB3BPQ13352 177 aaPredicted RBP13.14□□□□□ -0.31
LCTL-201ENST00000341509 PDIA5Q14554 519 aa13.14□□□□□ -0.31
LCTL-201ENST00000341509 ZNF473Q8WTR7 871 aaKnown RBP13.14□□□□□ -0.31
LCTL-201ENST00000341509 NYXQ9GZU5 481 aa13.14□□□□□ -0.31
LCTL-201ENST00000341509 RIC8AQ9NPQ8 531 aa13.14□□□□□ -0.31
LCTL-201ENST00000341509 ARFGEF1Q9Y6D6 1849 aa13.14□□□□□ -0.31
LCTL-201ENST00000341509 E7EVH7 732 aa13.14□□□□□ -0.31
LCTL-201ENST00000341509 MYBP10242 640 aa13.14□□□□□ -0.31
LCTL-201ENST00000341509 IFT88Q13099 833 aa13.14□□□□□ -0.31
LCTL-201ENST00000341509 SEMA3FQ13275 785 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms