RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 EMILIN3Q9NT22 766 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 MTRF1LQ9UGC7 380 aaKnown RBP10.32□□□□□ -0.76
TRERF1-201ENST00000340840 KIAA1024Q9UPX6 916 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 BCL9O00512 1426 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 SHOX2O60902 331 aaPredicted RBP10.32□□□□□ -0.76
TRERF1-201ENST00000340840 CLSTN1O94985 981 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 HLA-DOAP06340 250 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 MDH1P40925 334 aaKnown RBP10.32□□□□□ -0.76
TRERF1-201ENST00000340840 CETN1Q12798 172 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 PTPROQ16827 1216 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 MIIPQ5JXC2 388 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 FBXW10Q5XX13 1052 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 PPP4R3CPQ6ZMV5 832 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 CROCCP2Q86T23 111 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 KIAA0895Q8NCT3 520 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 TLR10Q9BXR5 811 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 METTL14Q9HCE5 456 aaKnown RBP10.32□□□□□ -0.76
TRERF1-201ENST00000340840 FAM114A2Q9NRY5 505 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 DNM3Q9UQ16 869 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 ZNF142P52746 1687 aaPredicted RBP10.32□□□□□ -0.76
TRERF1-201ENST00000340840 PALM3A6NDB9 673 aaPredicted RBP10.32□□□□□ -0.76
TRERF1-201ENST00000340840 PJA2O43164 708 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 MAP2K1Q02750 393 aaPredicted RBP10.32□□□□□ -0.76
TRERF1-201ENST00000340840 NAB2Q15742 525 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 ALKBH5Q6P6C2 394 aaKnown RBP10.32□□□□□ -0.76
TRERF1-201ENST00000340840 HS2ST1Q7LGA3 356 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 U2AF1L4Q8WU68 220 aaKnown RBP10.32□□□□□ -0.76
TRERF1-201ENST00000340840 NCAPGQ9BPX3 1015 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 TMEM260Q9NX78 707 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 SAMD15Q9P1V8 674 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 SIK3Q9Y2K2 1263 aa10.32□□□□□ -0.76
TRERF1-201ENST00000340840 CDC37Q16543 378 aaPredicted RBP10.31□□□□□ -0.76
TRERF1-201ENST00000340840 INTS5Q6P9B9 1019 aaKnown RBP10.31□□□□□ -0.76
TRERF1-201ENST00000340840 NEDD1Q8NHV4 660 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 ZNF473Q8WTR7 871 aaKnown RBP10.31□□□□□ -0.76
TRERF1-201ENST00000340840 MTMR8Q96EF0 704 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 CCT8L2Q96SF2 557 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 PLCB1Q9NQ66 1216 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 PACSIN2Q9UNF0 486 aaPredicted RBP10.31□□□□□ -0.76
TRERF1-201ENST00000340840 AFPP02771 609 aaKnown RBP10.31□□□□□ -0.76
TRERF1-201ENST00000340840 MMP10P09238 476 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 STAT1P42224 750 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 CLUL1Q15846 466 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 SUGP1Q8IWZ8 645 aaKnown RBP10.31□□□□□ -0.76
TRERF1-201ENST00000340840 TSEN2Q8NCE0 465 aaKnown RBP10.31□□□□□ -0.76
TRERF1-201ENST00000340840 RNPC3Q96LT9 517 aaKnown RBP10.31□□□□□ -0.76
TRERF1-201ENST00000340840 DPH5Q9H2P9 285 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 PSTPIP2Q9H939 334 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 LEMD3Q9Y2U8 911 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 DISP2A7MBM2 1401 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 AGPSO00116 658 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 CHUKO15111 745 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 TDP2O95551 362 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 PLA2G4BP0C869 781 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 KLRC1P26715 233 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 TNFRSF8P28908 595 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 HNRNPH1P31943 449 aaKnown RBP10.31□□□□□ -0.76
TRERF1-201ENST00000340840 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRERF1-201ENST00000340840 KLHDC7AQ5VTJ3 777 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 LRRC47Q8N1G4 583 aaKnown RBP10.31□□□□□ -0.76
TRERF1-201ENST00000340840 UPF1Q92900 1129 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRERF1-201ENST00000340840 EHD4Q9H223 541 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 HDAC9Q9UKV0 1011 aa10.31□□□□□ -0.76
TRERF1-201ENST00000340840 FAM13AO94988 1023 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 GRB10Q13322 594 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 LRIG3Q6UXM1 1119 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 ANKS1AQ92625 1134 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 AP1M1Q9BXS5 423 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 PARP4Q9UKK3 1724 aaKnown RBP10.3□□□□□ -0.76
TRERF1-201ENST00000340840 ESYT2A0FGR8 921 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 GMNCA6NCL1 334 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 SMIM23A6NLE4 172 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 GLI1P08151 1106 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 PTGISQ16647 500 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 NAA35Q5VZE5 725 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 UIMC1Q96RL1 719 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 NOVA2Q9UNW9 492 aaKnown RBP10.3□□□□□ -0.76
TRERF1-201ENST00000340840 MYH8P13535 1937 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 SPDYE3A6NKU9 549 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 ZNF263O14978 683 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 UFL1O94874 794 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 KIF4AO95239 1232 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 CPP00450 1065 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 TNFAIP3P21580 790 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 GBP2P32456 591 aaPredicted RBP10.3□□□□□ -0.76
TRERF1-201ENST00000340840 DHX9Q08211 1270 aaKnown RBP10.3□□□□□ -0.76
TRERF1-201ENST00000340840 KCNH2Q12809 1159 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 PPP4R3AQ6IN85 833 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 YY1AP1Q9H869 796 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 CNOT10Q9H9A5 744 aaKnown RBP10.3□□□□□ -0.76
TRERF1-201ENST00000340840 POLD4Q9HCU8 107 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 IL17RBQ9NRM6 502 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 STK24Q9Y6E0 443 aa10.3□□□□□ -0.76
TRERF1-201ENST00000340840 TRPM3Q9HCF6 1732 aaPredicted RBP10.3□□□□□ -0.76
TRERF1-201ENST00000340840 RAD51CO43502 376 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 FERP16591 822 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 RASA1P20936 1047 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 CACNB1Q02641 598 aaPredicted RBP10.29□□□□□ -0.76
TRERF1-201ENST00000340840 DRP2Q13474 957 aa10.29□□□□□ -0.76
TRERF1-201ENST00000340840 TTLL12Q14166 644 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms