RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 STXBP3O00186 592 aa16.04■□□□□ 0.16
RET-201ENST00000340058 ACTN4O43707 911 aaKnown RBP16.04■□□□□ 0.16
RET-201ENST00000340058 TUBB2AQ13885 445 aa16.04■□□□□ 0.16
RET-201ENST00000340058 ZNF394Q53GI3 561 aa16.04■□□□□ 0.16
RET-201ENST00000340058 CEP85LQ5SZL2 805 aa16.04■□□□□ 0.16
RET-201ENST00000340058 MCTP2Q6DN12 878 aa16.04■□□□□ 0.16
RET-201ENST00000340058 PANX2Q96RD6 677 aa16.04■□□□□ 0.16
RET-201ENST00000340058 IWS1Q96ST2 819 aa16.04■□□□□ 0.16
RET-201ENST00000340058 TUBB2BQ9BVA1 445 aa16.04■□□□□ 0.16
RET-201ENST00000340058 CNTNAP4Q9C0A0 1308 aa16.04■□□□□ 0.16
RET-201ENST00000340058 ATP2A1O14983 1001 aa16.04■□□□□ 0.16
RET-201ENST00000340058 CD58P19256 250 aa16.04■□□□□ 0.16
RET-201ENST00000340058 GFPT1Q06210 699 aaPredicted RBP16.04■□□□□ 0.16
RET-201ENST00000340058 KCTD2Q14681 263 aa16.04■□□□□ 0.16
RET-201ENST00000340058 BSPRYQ5W0U4 402 aa16.04■□□□□ 0.16
RET-201ENST00000340058 SNRNP48Q6IEG0 339 aaKnown RBP16.04■□□□□ 0.16
RET-201ENST00000340058 CCDC63Q8NA47 563 aa16.04■□□□□ 0.16
RET-201ENST00000340058 RABGGTAQ92696 567 aa16.04■□□□□ 0.16
RET-201ENST00000340058 MAK16Q9BXY0 300 aaKnown RBP16.04■□□□□ 0.16
RET-201ENST00000340058 hCG_1984214I3L0E3 225 aa16.04■□□□□ 0.16
RET-201ENST00000340058 TFAMQ00059 246 aaKnown RBP16.04■□□□□ 0.16
RET-201ENST00000340058 ZNF746Q6NUN9 644 aaPredicted RBP16.04■□□□□ 0.16
RET-201ENST00000340058 ALKBH5Q6P6C2 394 aaKnown RBP16.04■□□□□ 0.16
RET-201ENST00000340058 PPP1R21Q6ZMI0 780 aa16.04■□□□□ 0.16
RET-201ENST00000340058 MICALCLQ6ZW33 695 aa16.04■□□□□ 0.16
RET-201ENST00000340058 CCDC91Q7Z6B0 441 aa16.04■□□□□ 0.16
RET-201ENST00000340058 ZNF713Q8N859 430 aaPredicted RBP16.04■□□□□ 0.16
RET-201ENST00000340058 ATP6V0A1Q93050 837 aa16.04■□□□□ 0.16
RET-201ENST00000340058 AP1M1Q9BXS5 423 aa16.04■□□□□ 0.16
RET-201ENST00000340058 TRIM10Q9UDY6 481 aa16.04■□□□□ 0.16
RET-201ENST00000340058 PCDHA13Q9Y5I0 950 aa16.04■□□□□ 0.16
RET-201ENST00000340058 ADGRG1Q9Y653 693 aa16.04■□□□□ 0.16
RET-201ENST00000340058 GPR75-ASB3A0A0A6YYF3 556 aa16.04■□□□□ 0.16
RET-201ENST00000340058 SLC16A4O15374 487 aa16.04■□□□□ 0.16
RET-201ENST00000340058 NMT1P30419 496 aaKnown RBP16.04■□□□□ 0.16
RET-201ENST00000340058 KCNH2Q12809 1159 aa16.04■□□□□ 0.16
RET-201ENST00000340058 SCYL2Q6P3W7 929 aa16.04■□□□□ 0.16
RET-201ENST00000340058 GSPT2Q8IYD1 628 aaKnown RBP16.04■□□□□ 0.16
RET-201ENST00000340058 SPZ1Q9BXG8 430 aa16.04■□□□□ 0.16
RET-201ENST00000340058 KCNQ5Q9NR82 932 aa16.04■□□□□ 0.16
RET-201ENST00000340058 PACSIN2Q9UNF0 486 aaPredicted RBP16.04■□□□□ 0.16
RET-201ENST00000340058 SIGLEC1Q9BZZ2 1709 aa16.04■□□□□ 0.16
RET-201ENST00000340058 IPO5O00410 1097 aaKnown RBP16.03■□□□□ 0.16
RET-201ENST00000340058 NCK2O43639 380 aa16.03■□□□□ 0.16
RET-201ENST00000340058 CNGA1P29973 690 aa16.03■□□□□ 0.16
RET-201ENST00000340058 MXI1P50539 228 aa16.03■□□□□ 0.16
RET-201ENST00000340058 HMGCS2P54868 508 aa16.03■□□□□ 0.16
RET-201ENST00000340058 CCZ1BP86790 482 aa16.03■□□□□ 0.16
RET-201ENST00000340058 CCZ1P86791 482 aaPredicted RBP16.03■□□□□ 0.16
RET-201ENST00000340058 MTMR1Q13613 665 aa16.03■□□□□ 0.16
RET-201ENST00000340058 LDHDQ86WU2 507 aa16.03■□□□□ 0.16
RET-201ENST00000340058 DCAF4Q8WV16 495 aa16.03■□□□□ 0.16
RET-201ENST00000340058 NAP1L3Q99457 506 aaPredicted RBP16.03■□□□□ 0.16
RET-201ENST00000340058 EPB41L5Q9HCM4 733 aa16.03■□□□□ 0.16
RET-201ENST00000340058 AGPAT5Q9NUQ2 364 aa16.03■□□□□ 0.16
RET-201ENST00000340058 PDE4DIPQ5VU43 2346 aa16.03■□□□□ 0.16
RET-201ENST00000340058 MYMKA6NI61 221 aa16.03■□□□□ 0.16
RET-201ENST00000340058 BUB1BO60566 1050 aaPredicted RBP16.03■□□□□ 0.16
RET-201ENST00000340058 SNX1Q13596 522 aa16.03■□□□□ 0.16
RET-201ENST00000340058 BRD3Q15059 726 aa16.03■□□□□ 0.16
RET-201ENST00000340058 C16orf86Q6ZW13 317 aa16.03■□□□□ 0.16
RET-201ENST00000340058 OTUD6BQ8N6M0 293 aa16.03■□□□□ 0.16
RET-201ENST00000340058 JMJD4Q9H9V9 463 aa16.03■□□□□ 0.16
RET-201ENST00000340058 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
RET-201ENST00000340058 BCL9O00512 1426 aa16.03■□□□□ 0.16
RET-201ENST00000340058 MYCP01106 439 aaPredicted RBP16.03■□□□□ 0.16
RET-201ENST00000340058 TMEM191BP0C7N4 346 aa16.03■□□□□ 0.16
RET-201ENST00000340058 PRMT6Q96LA8 375 aaPredicted RBP16.03■□□□□ 0.16
RET-201ENST00000340058 NLRP4Q96MN2 994 aa16.03■□□□□ 0.16
RET-201ENST00000340058 ZCCHC17Q9NP64 241 aaKnown RBP16.03■□□□□ 0.16
RET-201ENST00000340058 PPANQ9NQ55 473 aaKnown RBP16.03■□□□□ 0.16
RET-201ENST00000340058 TTLL3Q9Y4R7 772 aa16.03■□□□□ 0.16
RET-201ENST00000340058 KIF20BQ96Q89 1820 aa16.02■□□□□ 0.16
RET-201ENST00000340058 RICTORQ6R327 1708 aa16.02■□□□□ 0.16
RET-201ENST00000340058 MYL1P05976 194 aa16.02■□□□□ 0.16
RET-201ENST00000340058 LRRC63Q05C16 580 aa16.02■□□□□ 0.16
RET-201ENST00000340058 ADCY1Q08828 1119 aa16.02■□□□□ 0.16
RET-201ENST00000340058 SEC23AQ15436 765 aa16.02■□□□□ 0.16
RET-201ENST00000340058 PADI6Q6TGC4 694 aa16.02■□□□□ 0.16
RET-201ENST00000340058 SAMD7Q7Z3H4 446 aa16.02■□□□□ 0.16
RET-201ENST00000340058 ACER1Q8TDN7 264 aa16.02■□□□□ 0.16
RET-201ENST00000340058 NT5C1BQ96P26 610 aa16.02■□□□□ 0.16
RET-201ENST00000340058 TUBE1Q9UJT0 475 aa16.02■□□□□ 0.16
RET-201ENST00000340058 NEURL4Q96JN8 1562 aa16.02■□□□□ 0.16
RET-201ENST00000340058 GOLGA8SH3BPF8 625 aa16.02■□□□□ 0.16
RET-201ENST00000340058 EZH2Q15910 746 aaKnown RBP16.02■□□□□ 0.16
RET-201ENST00000340058 ILDR1Q86SU0 546 aaPredicted RBP16.02■□□□□ 0.16
RET-201ENST00000340058 SYCE1Q8N0S2 351 aa16.02■□□□□ 0.16
RET-201ENST00000340058 FAM217BQ9NTX9 383 aaPredicted RBP16.02■□□□□ 0.16
RET-201ENST00000340058 FAM205AQ6ZU69 1335 aa16.02■□□□□ 0.15
RET-201ENST00000340058 ECE1P42892 770 aa16.02■□□□□ 0.15
RET-201ENST00000340058 KLK7P49862 253 aa16.02■□□□□ 0.15
RET-201ENST00000340058 PDE6CP51160 858 aa16.02■□□□□ 0.15
RET-201ENST00000340058 SUPT20HL1Q3ZLR7 823 aa16.02■□□□□ 0.15
RET-201ENST00000340058 SCARA5Q6ZMJ2 495 aa16.02■□□□□ 0.15
RET-201ENST00000340058 ZBTB8OSQ8IWT0 167 aa16.02■□□□□ 0.15
RET-201ENST00000340058 ARFGAP2Q8N6H7 521 aa16.02■□□□□ 0.15
RET-201ENST00000340058 RETREG2Q8NC44 543 aa16.02■□□□□ 0.15
RET-201ENST00000340058 IPO4Q8TEX9 1081 aaKnown RBP16.02■□□□□ 0.15
RET-201ENST00000340058 ZNF653Q96CK0 615 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms