RNA–Protein interactions for RNA: ENST00000339697.4

SERINC1-201, Transcript of serine incorporator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERINC1, Length 3,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERINC1-201ENST00000339697 KLHL10Q6JEL2 608 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 LBX2Q6XYB7 198 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 LRRC55Q6ZSA7 311 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 GPC2Q8N158 579 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 SYT2Q8N9I0 419 aaPredicted RBP11.3□□□□□ -0.6
SERINC1-201ENST00000339697 CALML4Q96GE6 196 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 ARHGAP6O43182 974 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 CPP00450 1065 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 TECP42680 631 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 KRT31Q15323 416 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 UBE2SQ16763 222 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 CCDC96Q2M329 555 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 NEK9Q8TD19 979 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 ACER1Q8TDN7 264 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 NELFBQ8WX92 580 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 MRPL11Q9Y3B7 192 aaKnown RBP11.3□□□□□ -0.6
SERINC1-201ENST00000339697 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
SERINC1-201ENST00000339697 PHLPP2Q6ZVD8 1323 aa11.3□□□□□ -0.6
SERINC1-201ENST00000339697 RBM5P52756 815 aaKnown RBP eCLIP11.29□□□□□ -0.6
SERINC1-201ENST00000339697 SMC1AQ14683 1233 aaKnown RBP11.29□□□□□ -0.6
SERINC1-201ENST00000339697 P2RX5Q93086 422 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 PLIN2Q99541 437 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 ADAM21Q9UKJ8 722 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 PMS1P54277 932 aaKnown RBP11.29□□□□□ -0.6
SERINC1-201ENST00000339697 PPP4R3CPQ6ZMV5 832 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 SV2BQ7L1I2 683 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 NUDT12Q9BQG2 462 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 EDEM3Q9BZQ6 932 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 KCTD10Q9H3F6 313 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 TRMT1Q9NXH9 659 aaKnown RBP11.29□□□□□ -0.6
SERINC1-201ENST00000339697 UBIAD1Q9Y5Z9 338 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 MSH4O15457 936 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 LCA5LO95447 670 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 SFPQP23246 707 aaKnown RBP eCLIP11.29□□□□□ -0.6
SERINC1-201ENST00000339697 ATP2B2Q01814 1243 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 ENPEPQ07075 957 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 ARSHQ5FYA8 562 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 TTC19Q6DKK2 380 aaPredicted RBP11.29□□□□□ -0.6
SERINC1-201ENST00000339697 DPY19L2P1Q6NXN4 242 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 TRIM65Q6PJ69 517 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 OTOP1Q7RTM1 612 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 KCNK18Q7Z418 384 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 ZNF513Q8N8E2 541 aaPredicted RBP11.29□□□□□ -0.6
SERINC1-201ENST00000339697 RIT2Q99578 217 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 UBXN6Q9BZV1 441 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 SEMA6BQ9H3T3 888 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 OLFML3Q9NRN5 406 aa11.29□□□□□ -0.6
SERINC1-201ENST00000339697 UNCXA6NJT0 531 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 TCP10L2B9ZVM9 353 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 MFAP3LO75121 409 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 MAPTP10636 758 aaKnown RBP11.28□□□□□ -0.6
SERINC1-201ENST00000339697 COPB1P53618 953 aaKnown RBP11.28□□□□□ -0.6
SERINC1-201ENST00000339697 USP14P54578 494 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 EDRF1Q3B7T1 1238 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 PCNX4Q63HM2 1172 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 EFCAB13Q8IY85 973 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 GIMAP7Q8NHV1 300 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 CEP63Q96MT8 703 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 PCDHA12Q9UN75 941 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 USP20Q9Y2K6 914 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 ZNF541Q9H0D2 1346 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 GOLGA6L9A6NEM1 432 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 ATP8B1O43520 1251 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 GYPCP04921 128 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 KRT79Q5XKE5 535 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 HAUS3Q68CZ6 603 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 SCYL3Q8IZE3 742 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.67e-15■■□□□ 11.8
SERINC1-201ENST00000339697 GPRC5DQ9NZD1 345 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 PPP1R9AQ9ULJ8 1098 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 CTNND2Q9UQB3 1225 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 TRAF3IP3Q9Y228 551 aa11.28□□□□□ -0.6
SERINC1-201ENST00000339697 CYP11B2P19099 503 aa11.27□□□□□ -0.6
SERINC1-201ENST00000339697 USP8P40818 1118 aa11.27□□□□□ -0.6
SERINC1-201ENST00000339697 STK4Q13043 487 aa11.27□□□□□ -0.6
SERINC1-201ENST00000339697 RASA3Q14644 834 aa11.27□□□□□ -0.6
SERINC1-201ENST00000339697 TKFCQ3LXA3 575 aa11.27□□□□□ -0.6
SERINC1-201ENST00000339697 NAIF1Q69YI7 327 aaPredicted RBP11.27□□□□□ -0.6
SERINC1-201ENST00000339697 L3MBTL3Q96JM7 780 aaPredicted RBP11.27□□□□□ -0.6
SERINC1-201ENST00000339697 PPP1R13BQ96KQ4 1090 aa11.27□□□□□ -0.6
SERINC1-201ENST00000339697 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.6
SERINC1-201ENST00000339697 CAPN11Q9UMQ6 739 aa11.27□□□□□ -0.6
SERINC1-201ENST00000339697 GDAQ9Y2T3 454 aa11.27□□□□□ -0.6
SERINC1-201ENST00000339697 DAAM1Q9Y4D1 1078 aa11.27□□□□□ -0.6
SERINC1-201ENST00000339697 KCNJ18B7U540 433 aa11.27□□□□□ -0.61
SERINC1-201ENST00000339697 USP17L15C9J2P7 530 aa11.27□□□□□ -0.61
SERINC1-201ENST00000339697 USP17L13C9JLJ4 530 aa11.27□□□□□ -0.61
SERINC1-201ENST00000339697 USP17L11C9JVI0 530 aa11.27□□□□□ -0.61
SERINC1-201ENST00000339697 USP17L18D6R9N7 530 aa11.27□□□□□ -0.61
SERINC1-201ENST00000339697 USP17L22D6RA61 530 aa11.27□□□□□ -0.61
SERINC1-201ENST00000339697 USP17L17D6RBQ6 530 aa11.27□□□□□ -0.61
SERINC1-201ENST00000339697 USP17L19D6RCP7 530 aa11.27□□□□□ -0.61
SERINC1-201ENST00000339697 USP17L20D6RJB6 530 aa11.27□□□□□ -0.61
SERINC1-201ENST00000339697 ANKRD65E5RJM6 399 aa11.27□□□□□ -0.61
SERINC1-201ENST00000339697 PSMA7O14818 248 aa11.27□□□□□ -0.61
SERINC1-201ENST00000339697 DHX15O43143 795 aaKnown RBP11.27□□□□□ -0.61
SERINC1-201ENST00000339697 TEX33O43247 280 aa11.27□□□□□ -0.61
SERINC1-201ENST00000339697 NEBLO76041 1014 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms