RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 SEPT1Q8WYJ6 367 aa16.35■□□□□ 0.21
COMMD4-202ENST00000338995 IL25Q9H293 177 aa16.35■□□□□ 0.21
COMMD4-202ENST00000338995 BCAS3Q9H6U6 928 aa16.35■□□□□ 0.21
COMMD4-202ENST00000338995 PSTPIP2Q9H939 334 aa16.35■□□□□ 0.21
COMMD4-202ENST00000338995 CCDC69A6NI79 296 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 MAFGO15525 162 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 CALM1P0DP23 149 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 CALM2P0DP24 149 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 CALM3P0DP25 149 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 MKRN4PQ13434 485 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-202ENST00000338995 USP17L6PQ6QN14 398 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 EP400NLQ6ZTU2 488 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 RPAINQ86UA6 219 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 FAM178BQ8IXR5 827 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 ZNF654Q8IZM8 581 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 GLG1Q92896 1179 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 MAP4K1Q92918 833 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 GPRASP2Q96D09 838 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 SMARCAD1Q9H4L7 1026 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 EHMT1Q9H9B1 1298 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 SENP2Q9HC62 589 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 ERAP1Q9NZ08 941 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 KAT6AQ92794 2004 aa16.34■□□□□ 0.21
COMMD4-202ENST00000338995 SGSM2O43147 1006 aa16.33■□□□□ 0.2
COMMD4-202ENST00000338995 GSPT1P15170 499 aaKnown RBP16.33■□□□□ 0.2
COMMD4-202ENST00000338995 MCM5P33992 734 aa16.33■□□□□ 0.2
COMMD4-202ENST00000338995 TCF7P36402 384 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-202ENST00000338995 ADAM17P78536 824 aa16.33■□□□□ 0.2
COMMD4-202ENST00000338995 SEMA3FQ13275 785 aa16.33■□□□□ 0.2
COMMD4-202ENST00000338995 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-202ENST00000338995 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
COMMD4-202ENST00000338995 PABPC5Q96DU9 382 aaKnown RBP16.33■□□□□ 0.2
COMMD4-202ENST00000338995 TMEM87BQ96K49 555 aa16.33■□□□□ 0.2
COMMD4-202ENST00000338995 LMAN2LQ9H0V9 348 aa16.33■□□□□ 0.2
COMMD4-202ENST00000338995 NSUN3Q9H649 340 aaKnown RBP16.33■□□□□ 0.2
COMMD4-202ENST00000338995 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-202ENST00000338995 GRXCR2A6NFK2 248 aa16.32■□□□□ 0.2
COMMD4-202ENST00000338995 RRN3P2A6NIE6 340 aa16.32■□□□□ 0.2
COMMD4-202ENST00000338995 SPDYE3A6NKU9 549 aa16.32■□□□□ 0.2
COMMD4-202ENST00000338995 MEIS2O14770 477 aa16.32■□□□□ 0.2
COMMD4-202ENST00000338995 PDE4AP27815 886 aa16.32■□□□□ 0.2
COMMD4-202ENST00000338995 PPFIA1Q13136 1202 aa16.32■□□□□ 0.2
COMMD4-202ENST00000338995 PTPRSQ13332 1948 aa16.32■□□□□ 0.2
COMMD4-202ENST00000338995 MICAL3Q7RTP6 2002 aa16.32■□□□□ 0.2
COMMD4-202ENST00000338995 TRIM50Q86XT4 487 aa16.32■□□□□ 0.2
COMMD4-202ENST00000338995 C11orf84Q9BUA3 381 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-202ENST00000338995 BRWD1Q9NSI6 2320 aa16.31■□□□□ 0.2
COMMD4-202ENST00000338995 PRC1O43663 620 aa16.31■□□□□ 0.2
COMMD4-202ENST00000338995 CHRNA1P02708 482 aa16.31■□□□□ 0.2
COMMD4-202ENST00000338995 CSPP1Q1MSJ5 1256 aa16.31■□□□□ 0.2
COMMD4-202ENST00000338995 TCEAL5Q5H9L2 206 aa16.31■□□□□ 0.2
COMMD4-202ENST00000338995 IER5Q5VY09 327 aa16.31■□□□□ 0.2
COMMD4-202ENST00000338995 SYNE3Q6ZMZ3 975 aa16.31■□□□□ 0.2
COMMD4-202ENST00000338995 MB21D2Q8IYB1 491 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-202ENST00000338995 NEK9Q8TD19 979 aa16.31■□□□□ 0.2
COMMD4-202ENST00000338995 UPF3BQ9BZI7 483 aaKnown RBP16.31■□□□□ 0.2
COMMD4-202ENST00000338995 LY9Q9HBG7 655 aa16.31■□□□□ 0.2
COMMD4-202ENST00000338995 RBM8AQ9Y5S9 174 aaKnown RBP16.31■□□□□ 0.2
COMMD4-202ENST00000338995 SIP14410 1827 aa16.31■□□□□ 0.2
COMMD4-202ENST00000338995 M0QZ92 97 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 ENPP3O14638 875 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 GHRP10912 638 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 IL9P15248 144 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 CTNNB1P35222 781 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 BMPR1AP36894 532 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 LIFRP42702 1097 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 ANTXR2P58335 489 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 MTMR1Q13613 665 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 GRIK4Q16099 956 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 PPP2R3CQ969Q6 453 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 AZI2Q9H6S1 392 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 PRKAG3Q9UGI9 489 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 TUBE1Q9UJT0 475 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 SLC12A7Q9Y666 1083 aa16.3■□□□□ 0.2
COMMD4-202ENST00000338995 PRR33A8MZF0 331 aa16.29■□□□□ 0.2
COMMD4-202ENST00000338995 C5orf67F2Z3F1 127 aa16.29■□□□□ 0.2
COMMD4-202ENST00000338995 H3BQ06 376 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-202ENST00000338995 ATP9AO75110 1047 aa16.29■□□□□ 0.2
COMMD4-202ENST00000338995 BTG3Q14201 252 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-202ENST00000338995 FAM43BQ6ZT52 329 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-202ENST00000338995 TEX2Q8IWB9 1127 aa16.29■□□□□ 0.2
COMMD4-202ENST00000338995 SRBD1Q8N5C6 995 aaKnown RBP16.29■□□□□ 0.2
COMMD4-202ENST00000338995 MYL10Q9BUA6 226 aa16.29■□□□□ 0.2
COMMD4-202ENST00000338995 PLVAPQ9BX97 442 aa16.29■□□□□ 0.2
COMMD4-202ENST00000338995 FTHL17Q9BXU8 183 aa16.29■□□□□ 0.2
COMMD4-202ENST00000338995 CD320Q9NPF0 282 aa16.29■□□□□ 0.2
COMMD4-202ENST00000338995 JADE2Q9NQC1 790 aa16.29■□□□□ 0.2
COMMD4-202ENST00000338995 CLDND1Q9NY35 253 aa16.29■□□□□ 0.2
COMMD4-202ENST00000338995 SQORQ9Y6N5 450 aa16.29■□□□□ 0.2
COMMD4-202ENST00000338995 REV3LO60673 3130 aa16.29■□□□□ 0.2
COMMD4-202ENST00000338995 GSTTP1A0A1W2PQM5 241 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 STAG3L1P0CL83 205 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 KCNA2P16389 499 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 ITGB5P18084 799 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 MARK3P27448 753 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 LPIN1Q14693 890 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 TSHZ1Q6ZSZ6 1077 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 DNAJB3Q8WWF6 145 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 SDF4Q9BRK5 362 aa16.28■□□□□ 0.2
COMMD4-202ENST00000338995 RNF216Q9NWF9 866 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms