RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 NEK1Q96PY6 1258 aa12.24□□□□□ -0.45
CAPN3-202ENST00000337571 BCAS3Q9H6U6 928 aa12.24□□□□□ -0.45
CAPN3-202ENST00000337571 SETD4Q9NVD3 440 aa12.24□□□□□ -0.45
CAPN3-202ENST00000337571 INSL6Q9Y581 213 aa12.24□□□□□ -0.45
CAPN3-202ENST00000337571 KAT6AQ92794 2004 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 DOCK5Q9H7D0 1870 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 MAFGO15525 162 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 TREHO43280 583 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 CAND2O75155 1236 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 DEFB103AP81534 67 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 ARHGAP4P98171 946 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 HIC1Q14526 733 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 BMP2KLQ5H9B9 411 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 FAM117BQ6P1L5 589 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 HEATR3Q7Z4Q2 680 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 TMCO2Q7Z6W1 182 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-202ENST00000337571 MICU3Q86XE3 530 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 RAB11FIP4Q86YS3 637 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 DBF4BQ8NFT6 615 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 ADAMTS19Q8TE59 1207 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 SEPT8Q92599 483 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 WNT8BQ93098 351 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 GPRASP2Q96D09 838 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 LRRC2Q9BYS8 371 aa12.23□□□□□ -0.45
CAPN3-202ENST00000337571 RBM28Q9NW13 759 aaKnown RBP12.23□□□□□ -0.45
CAPN3-202ENST00000337571 SPTBN5Q9NRC6 3674 aaKnown RBP12.23□□□□□ -0.45
CAPN3-202ENST00000337571 NRCAMQ92823 1304 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 hCG_1642624A0A1W2PR95 340 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 LCHNA4D1U4 455 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 TCF7P36402 384 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-202ENST00000337571 FGD1P98174 961 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 SEMA3FQ13275 785 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 GRB10Q13322 594 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 MTMR1Q13613 665 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 PLEKHG4Q58EX7 1191 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 CENPQQ7L2Z9 268 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-202ENST00000337571 SGMS1Q86VZ5 419 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 MYOCDQ8IZQ8 938 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 SEPT1Q8WYJ6 367 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 GLG1Q92896 1179 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 TNPO1Q92973 898 aaKnown RBP12.22□□□□□ -0.45
CAPN3-202ENST00000337571 TGS1Q96RS0 853 aaKnown RBP12.22□□□□□ -0.45
CAPN3-202ENST00000337571 LMCD1Q9NZU5 365 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 MTUS1Q9ULD2 1270 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 PCDHA6Q9UN73 950 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 COG5Q9UP83 839 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 PCDHA8Q9Y5H6 950 aa12.22□□□□□ -0.45
CAPN3-202ENST00000337571 PTPRSQ13332 1948 aa12.21□□□□□ -0.45
CAPN3-202ENST00000337571 EPOPA6NHQ4 379 aa12.21□□□□□ -0.45
CAPN3-202ENST00000337571 ZBTB43O43298 467 aa12.21□□□□□ -0.45
CAPN3-202ENST00000337571 CTSHP09668 335 aa12.21□□□□□ -0.45
CAPN3-202ENST00000337571 KRT32Q14532 448 aa12.21□□□□□ -0.45
CAPN3-202ENST00000337571 MBTPS1Q14703 1052 aa12.21□□□□□ -0.45
CAPN3-202ENST00000337571 TRAF7Q6Q0C0 670 aa12.21□□□□□ -0.45
CAPN3-202ENST00000337571 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.21□□□□□ -0.45
CAPN3-202ENST00000337571 TMTC3Q6ZXV5 915 aa12.21□□□□□ -0.45
CAPN3-202ENST00000337571 DHX32Q7L7V1 743 aaKnown RBP12.21□□□□□ -0.45
CAPN3-202ENST00000337571 RSPH3Q86UC2 560 aa12.21□□□□□ -0.45
CAPN3-202ENST00000337571 HLA-CQ95604 372 aa12.21□□□□□ -0.45
CAPN3-202ENST00000337571 UHRF1Q96T88 793 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-202ENST00000337571 SMARCAD1Q9H4L7 1026 aa12.21□□□□□ -0.45
CAPN3-202ENST00000337571 ERAP1Q9NZ08 941 aa12.21□□□□□ -0.45
CAPN3-202ENST00000337571 NAP1L2Q9ULW6 460 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-202ENST00000337571 ATP9AO75110 1047 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 ARHGEF15O94989 841 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 UPP2O95045 317 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 FOSP01100 380 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-202ENST00000337571 HMGB1P09429 215 aaKnown RBP12.2□□□□□ -0.46
CAPN3-202ENST00000337571 ITGB5P18084 799 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 HOXC8P31273 242 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 NAPAP54920 295 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 ERVK-21P61565 698 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 UBE2SQ16763 222 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 RTN1Q16799 776 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 TCTN1Q2MV58 587 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 KRT40Q6A162 431 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 TAF2Q6P1X5 1199 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 TRIM50Q86XT4 487 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 TEX2Q8IWB9 1127 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 LMBR1Q8WVP7 490 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 APBB2Q92870 758 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 SDF4Q9BRK5 362 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 SUGCTQ9HAC7 445 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 JADE2Q9NQC1 790 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 PKD2L1Q9P0L9 805 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 UBIAD1Q9Y5Z9 338 aa12.2□□□□□ -0.46
CAPN3-202ENST00000337571 V9GY48 417 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-202ENST00000337571 GSTTP1A0A1W2PQM5 241 aa12.19□□□□□ -0.46
CAPN3-202ENST00000337571 LINC01553A4QN01 128 aa12.19□□□□□ -0.46
CAPN3-202ENST00000337571 CDC45O75419 566 aa12.19□□□□□ -0.46
CAPN3-202ENST00000337571 KCNA2P16389 499 aa12.19□□□□□ -0.46
CAPN3-202ENST00000337571 ZNF76P36508 570 aa12.19□□□□□ -0.46
CAPN3-202ENST00000337571 TFF2Q03403 129 aa12.19□□□□□ -0.46
CAPN3-202ENST00000337571 PPFIA1Q13136 1202 aa12.19□□□□□ -0.46
CAPN3-202ENST00000337571 FAM26DQ5JW98 314 aa12.19□□□□□ -0.46
CAPN3-202ENST00000337571 APOA5Q6Q788 366 aa12.19□□□□□ -0.46
CAPN3-202ENST00000337571 YME1L1Q96TA2 773 aa12.19□□□□□ -0.46
CAPN3-202ENST00000337571 IFIH1Q9BYX4 1025 aaKnown RBP12.19□□□□□ -0.46
CAPN3-202ENST00000337571 GLT8D2Q9H1C3 349 aa12.19□□□□□ -0.46
CAPN3-202ENST00000337571 AZI2Q9H6S1 392 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms