RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 NCK2O43639 380 aa20.92■□□□□ 0.94
RFTN1-201ENST00000334133 N4BP1O75113 896 aaKnown RBP20.92■□□□□ 0.94
RFTN1-201ENST00000334133 PRPF6O94906 941 aaKnown RBP20.92■□□□□ 0.94
RFTN1-201ENST00000334133 SPATA31C1P0DKV0 1188 aa20.92■□□□□ 0.94
RFTN1-201ENST00000334133 RASSF7Q02833 373 aa20.92■□□□□ 0.94
RFTN1-201ENST00000334133 MIGA2Q7L4E1 593 aa20.92■□□□□ 0.94
RFTN1-201ENST00000334133 SFR1Q86XK3 245 aa20.92■□□□□ 0.94
RFTN1-201ENST00000334133 PIGOQ8TEQ8 1089 aa20.92■□□□□ 0.94
RFTN1-201ENST00000334133 REEP2Q9BRK0 252 aa20.92■□□□□ 0.94
RFTN1-201ENST00000334133 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.92■□□□□ 0.94
RFTN1-201ENST00000334133 MSH4O15457 936 aa20.92■□□□□ 0.94
RFTN1-201ENST00000334133 MATR3P43243 847 aaKnown RBP eCLIP20.92■□□□□ 0.94
RFTN1-201ENST00000334133 C2orf54Q08AI8 447 aa20.92■□□□□ 0.94
RFTN1-201ENST00000334133 BHMT2Q9H2M3 363 aa20.92■□□□□ 0.94
RFTN1-201ENST00000334133 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.92■□□□□ 0.94
RFTN1-201ENST00000334133 EML1O00423 815 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 POLD1P28340 1107 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 NAP1L1P55209 391 aaKnown RBP20.91■□□□□ 0.94
RFTN1-201ENST00000334133 KCNA1Q09470 495 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 TUBB2AQ13885 445 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 HYIQ5T013 277 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 DNAAF5Q86Y56 855 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 TUBB2BQ9BVA1 445 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 MYBP10242 640 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 ACTN1P12814 892 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 FAM83BQ5T0W9 1011 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 RAB21Q9UL25 225 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 NOL4O94818 638 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 MAGEA1P43355 309 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 CTTNQ14247 550 aaKnown RBP20.91■□□□□ 0.94
RFTN1-201ENST00000334133 PAPD7Q5XG87 772 aaKnown RBP20.91■□□□□ 0.94
RFTN1-201ENST00000334133 PDXDC1Q6P996 788 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 SLFN12Q8IYM2 578 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 COG1Q8WTW3 980 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 CRYGNQ8WXF5 182 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 KCTD10Q9H3F6 313 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 VEZTQ9HBM0 779 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 DNM3Q9UQ16 869 aa20.91■□□□□ 0.94
RFTN1-201ENST00000334133 CYP3A7-CYP3A51PA0A087WV96 503 aa20.9■□□□□ 0.94
RFTN1-201ENST00000334133 TLR2O60603 784 aa20.9■□□□□ 0.94
RFTN1-201ENST00000334133 CYP3A7P24462 503 aa20.9■□□□□ 0.94
RFTN1-201ENST00000334133 NR2F2P24468 414 aa20.9■□□□□ 0.94
RFTN1-201ENST00000334133 GIT2Q14161 759 aa20.9■□□□□ 0.94
RFTN1-201ENST00000334133 PHACTR2O75167 634 aa20.9■□□□□ 0.94
RFTN1-201ENST00000334133 AP3B2Q13367 1082 aa20.9■□□□□ 0.94
RFTN1-201ENST00000334133 RAPGEF1Q13905 1077 aa20.9■□□□□ 0.94
RFTN1-201ENST00000334133 NFRKBQ6P4R8 1299 aa20.9■□□□□ 0.94
RFTN1-201ENST00000334133 RUSC1Q9BVN2 902 aa20.9■□□□□ 0.94
RFTN1-201ENST00000334133 PKNOX2Q96KN3 472 aa20.89■□□□□ 0.94
RFTN1-201ENST00000334133 CLIC2O15247 247 aa20.89■□□□□ 0.93
RFTN1-201ENST00000334133 USO1O60763 962 aaKnown RBP20.89■□□□□ 0.93
RFTN1-201ENST00000334133 EPS15P42566 896 aa20.89■□□□□ 0.93
RFTN1-201ENST00000334133 HAUS3Q68CZ6 603 aa20.89■□□□□ 0.93
RFTN1-201ENST00000334133 CC2D2BQ6DHV5 1058 aa20.89■□□□□ 0.93
RFTN1-201ENST00000334133 EHBP1Q8NDI1 1231 aa20.89■□□□□ 0.93
RFTN1-201ENST00000334133 GMCL1Q96IK5 515 aa20.89■□□□□ 0.93
RFTN1-201ENST00000334133 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.89■□□□□ 0.93
RFTN1-201ENST00000334133 SH2D4AQ9H788 454 aa20.89■□□□□ 0.93
RFTN1-201ENST00000334133 L1RE1Q9UN81 338 aa20.89■□□□□ 0.93
RFTN1-201ENST00000334133 HNRNPH3P31942 346 aaKnown RBP20.88■□□□□ 0.93
RFTN1-201ENST00000334133 HGSNATQ68CP4 663 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 KSR1Q8IVT5 923 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 GMCL1P1Q8NEA9 526 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 GLT8D2Q9H1C3 349 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 SREBF1P36956 1147 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 HDLBPQ00341 1268 aaKnown RBP20.88■□□□□ 0.93
RFTN1-201ENST00000334133 CDK17Q00537 523 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 DCAF17Q5H9S7 520 aaPredicted RBP20.88■□□□□ 0.93
RFTN1-201ENST00000334133 FAM133AQ8N9E0 248 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 MBOAT7Q96N66 472 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 NAP1L4Q99733 375 aaKnown RBP20.88■□□□□ 0.93
RFTN1-201ENST00000334133 GLIS2Q9BZE0 524 aaPredicted RBP20.88■□□□□ 0.93
RFTN1-201ENST00000334133 PLEKHA4Q9H4M7 779 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 FBXO28Q9NVF7 368 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 ATP8B1O43520 1251 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 ERLIN1O75477 346 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 HOXD13P35453 343 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 EZH2Q15910 746 aaKnown RBP20.88■□□□□ 0.93
RFTN1-201ENST00000334133 STYK1Q6J9G0 422 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 TRIM59Q8IWR1 403 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 TPH2Q8IWU9 490 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 FLAD1Q8NFF5 587 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 PURBQ96QR8 312 aaKnown RBP20.88■□□□□ 0.93
RFTN1-201ENST00000334133 UBXN6Q9BZV1 441 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 PKD2L1Q9P0L9 805 aa20.88■□□□□ 0.93
RFTN1-201ENST00000334133 MAP2K7O14733 419 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 KCNH2Q12809 1159 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 TCERG1LQ5VWI1 586 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 MRIQ9BWK5 157 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 POTEB2H3BUK9 544 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 TACC1O75410 805 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 SLC9A1P19634 815 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 RPA1P27694 616 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 TNNT3P45378 269 aaPredicted RBP20.87■□□□□ 0.93
RFTN1-201ENST00000334133 USP14P54578 494 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 CASP8Q14790 479 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 PTPROQ16827 1216 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 ERMNQ8TAM6 284 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 C7orf43Q8WVR3 580 aa20.87■□□□□ 0.93
RFTN1-201ENST00000334133 EIF2AK1Q9BQI3 630 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms