RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 SCG2P13521 617 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 UBA1P22314 1058 aaKnown RBP11.05□□□□□ -0.64
SYN3-201ENST00000332840 U2AF2P26368 475 aaKnown RBP eCLIP11.05□□□□□ -0.64
SYN3-201ENST00000332840 FPGSQ05932 587 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 PPIGQ13427 754 aaKnown RBP eCLIP11.05□□□□□ -0.64
SYN3-201ENST00000332840 GSE1Q14687 1217 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 PKN1Q16512 942 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 PFKFB3Q16875 520 aaPredicted RBP11.05□□□□□ -0.64
SYN3-201ENST00000332840 CELF3Q5SZQ8 465 aaKnown RBP11.05□□□□□ -0.64
SYN3-201ENST00000332840 TMEM63BQ5T3F8 832 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 MYSM1Q5VVJ2 828 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 SH3RF1Q7Z6J0 888 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 FAM177A1Q8N128 213 aaPredicted RBP11.05□□□□□ -0.64
SYN3-201ENST00000332840 TMEM199Q8N511 208 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 CCDC148Q8NFR7 591 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 IL31RAQ8NI17 732 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 LEO1Q8WVC0 666 aaPredicted RBP11.05□□□□□ -0.64
SYN3-201ENST00000332840 COPS5Q92905 334 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 GPKOWQ92917 476 aaPredicted RBP eCLIP11.05□□□□□ -0.64
SYN3-201ENST00000332840 BADQ92934 168 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 TRIM43Q96BQ3 446 aaPredicted RBP11.05□□□□□ -0.64
SYN3-201ENST00000332840 GPRASP2Q96D09 838 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 SENP7Q9BQF6 1050 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 MLXIPQ9HAP2 919 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 GJB4Q9NTQ9 266 aa11.05□□□□□ -0.64
SYN3-201ENST00000332840 REV3LO60673 3130 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 BAZ2BQ9UIF8 2168 aaKnown RBP11.04□□□□□ -0.64
SYN3-201ENST00000332840 hCG_1642624A0A1W2PR95 340 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 GOLGA6L4A6NEF3 574 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 SPATA31C2B4DYI2 1134 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 NOP56O00567 594 aaKnown RBP11.04□□□□□ -0.64
SYN3-201ENST00000332840 GADD45BO75293 160 aaPredicted RBP11.04□□□□□ -0.64
SYN3-201ENST00000332840 GGPS1O95749 300 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 F2P00734 622 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 CD4P01730 458 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 GNA11P29992 359 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 PSMC6P62333 389 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 MRPS9P82933 396 aaKnown RBP11.04□□□□□ -0.64
SYN3-201ENST00000332840 FAM47CQ5HY64 1035 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 ZNF697Q5TEC3 545 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 MFSD5Q6N075 450 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 METTL7BQ6UX53 244 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 SESTD1Q86VW0 696 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 CCDC155Q8N6L0 562 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 BICD2Q8TD16 824 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 GPT2Q8TD30 523 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 MYLIPQ8WY64 445 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 SYAP1Q96A49 352 aaPredicted RBP11.04□□□□□ -0.64
SYN3-201ENST00000332840 SPATA33Q96N06 139 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 FOXP1Q9H334 677 aaPredicted RBP11.04□□□□□ -0.64
SYN3-201ENST00000332840 HIPK3Q9H422 1215 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 BRMS1Q9HCU9 246 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 C6orf50Q9HD87 102 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 RCOR1Q9UKL0 485 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 NOD1Q9Y239 953 aa11.04□□□□□ -0.64
SYN3-201ENST00000332840 SMCO2A6NFE2 343 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 KIF28PB7ZC32 967 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 STXBP3O00186 592 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 PTGS1P23219 599 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 MTMR1Q13613 665 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 NBPF20Q3BBV1 942 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 C9orf50Q5SZB4 431 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 DIS3L2Q8IYB7 885 aaKnown RBP11.03□□□□□ -0.64
SYN3-201ENST00000332840 MAFAQ8NHW3 353 aaPredicted RBP11.03□□□□□ -0.64
SYN3-201ENST00000332840 USP28Q96RU2 1077 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 CDX2Q99626 313 aaPredicted RBP11.03□□□□□ -0.64
SYN3-201ENST00000332840 PHF20Q9BVI0 1012 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 GZF1Q9H116 711 aaPredicted RBP11.03□□□□□ -0.64
SYN3-201ENST00000332840 MTIF3Q9H2K0 278 aaKnown RBP11.03□□□□□ -0.64
SYN3-201ENST00000332840 SH3GLB2Q9NR46 395 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 RTEL1Q9NZ71 1219 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 PCDHA6Q9UN73 950 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 KCNJ14Q9UNX9 436 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 PCDHA8Q9Y5H6 950 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 GRIN2DO15399 1336 aa11.03□□□□□ -0.64
SYN3-201ENST00000332840 B4GALT4O60513 344 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 YEATS4O95619 227 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 PFKMP08237 780 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 KRT2P35908 639 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 BFSP2Q13515 415 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 SHHQ15465 462 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 UBE2SQ16763 222 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 CAVIN1Q6NZI2 390 aaKnown RBP11.02□□□□□ -0.65
SYN3-201ENST00000332840 PSRC1Q6PGN9 363 aaPredicted RBP11.02□□□□□ -0.65
SYN3-201ENST00000332840 NOSTRINQ8IVI9 506 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 REXO1Q8N1G1 1221 aaKnown RBP11.02□□□□□ -0.65
SYN3-201ENST00000332840 C7orf31Q8N865 590 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 NOC4LQ9BVI4 516 aaKnown RBP11.02□□□□□ -0.65
SYN3-201ENST00000332840 ANO3Q9BYT9 981 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 ZMYND12Q9H0C1 365 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 TRPV6Q9H1D0 765 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 VPS54Q9P1Q0 977 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 RAPGEFL1Q9UHV5 662 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 ZNF215Q9UL58 517 aaPredicted RBP11.02□□□□□ -0.65
SYN3-201ENST00000332840 UBIAD1Q9Y5Z9 338 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 BDP1A6H8Y1 2624 aa11.02□□□□□ -0.65
SYN3-201ENST00000332840 BTBD18B2RXH4 712 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 PARNO95453 639 aaKnown RBP11.01□□□□□ -0.65
SYN3-201ENST00000332840 ITGB8P26012 769 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 RFC2P35250 354 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms