RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 CCDC34Q96HJ3 373 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 SENP7Q9BQF6 1050 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 ARHGAP39Q9C0H5 1083 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 BCAS3Q9H6U6 928 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 JPH1Q9HDC5 661 aaPredicted RBP13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 TUFT1Q9NNX1 390 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 KBTBD4Q9NVX7 518 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 RNF186Q9NXI6 227 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 SLC5A4Q9NY91 659 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 RGL1Q9NZL6 768 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 KIAA1468Q9P260 1216 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 HOOK1Q9UJC3 728 aaKnown RBP13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 GJD2Q9UKL4 321 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 SYNGAP1Q96PV0 1343 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 WDR64B1ANS9 1081 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 TRPA1O75762 1119 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 ARIH2O95376 493 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 SNAI1O95863 264 aaPredicted RBP13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 TGFB3P10600 412 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 SFNP31947 248 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 JAK3P52333 1124 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 FCGRTP55899 365 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 MSL3Q8N5Y2 521 aaKnown RBP13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 NEK9Q8TD19 979 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 RAD54LQ92698 747 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 STAMQ92783 540 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 DYDC2Q96IM9 177 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 TRIM47Q96LD4 638 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 APBA2Q99767 749 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 KATNBL1Q9H079 304 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 VTA1Q9NP79 307 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 TCEAL9Q9UHQ7 104 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 KIAA1024Q9UPX6 916 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 FARP2O94887 1054 aaPredicted RBP13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 SLITRK3O94933 977 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 CASP1P29466 404 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 RGS2P41220 211 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 PSMC4P43686 418 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 DPYDQ12882 1025 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 CTTNQ14247 550 aaKnown RBP13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 CCDC62Q6P9F0 684 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 KCNV1Q6PIU1 500 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 SMAP1Q8IYB5 467 aaPredicted RBP13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 RDM1Q8NG50 284 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 SPATA20Q8TB22 786 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 LARP4BQ92615 738 aaKnown RBP13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 TINF2Q9BSI4 451 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 PDGFCQ9NRA1 345 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 WRAP73Q9P2S5 460 aaPredicted RBP13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 SLC9A2Q9UBY0 812 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 DDX41Q9UJV9 622 aaKnown RBP13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 TELO2Q9Y4R8 837 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 SAMM50Q9Y512 469 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 PCDHA5Q9Y5H7 936 aa13.53□□□□□ -0.24
TRIM49B-201ENST00000332682 CASP8AP2Q9UKL3 1982 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 E9PMD0 336 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 GTPBP6O43824 516 aaPredicted RBP13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 SORBS3O60504 671 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 MUTP22033 750 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 CAP1Q01518 475 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 SP3Q02447 781 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 TYRO3Q06418 890 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 NEDD9Q14511 834 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 MCM6Q14566 821 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 LY6KQ17RY6 165 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 NT5DC1Q5TFE4 455 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 TAPT1Q6NXT6 567 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 CYFIP1Q7L576 1253 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 GAS2L3Q86XJ1 694 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 KCTD17Q8N5Z5 321 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 GIMAP8Q8ND71 665 aaPredicted RBP13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 BANK1Q8NDB2 785 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 SCFD2Q8WU76 684 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 LXNQ9BS40 222 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 FLRT1Q9NZU1 646 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 LOXHD1Q8IVV2 1947 aa13.52□□□□□ -0.25
TRIM49B-201ENST00000332682 A0A087WWV3 80 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 RBM47A0AV96 593 aaKnown RBP13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 GGPS1O95749 300 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 IGHA2P01877 340 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 MYL1P05976 194 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 P4HBP07237 508 aaKnown RBP13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 CCDC192P0DO97 292 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 CYP2B6P20813 491 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 SARSP49591 514 aaKnown RBP13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 ACTR2P61160 394 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 PSMC6P62333 389 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 SP4Q02446 784 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 CUL4BQ13620 913 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 OLFML2BQ68BL8 750 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 SASS6Q6UVJ0 657 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 METTL7BQ6UX53 244 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 TPH2Q8IWU9 490 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 BLZF1Q9H2G9 400 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 PCDHA10Q9Y5I2 948 aa13.51□□□□□ -0.25
TRIM49B-201ENST00000332682 BIN1O00499 593 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 SMC2O95347 1197 aa13.5□□□□□ -0.25
TRIM49B-201ENST00000332682 PLA2G4BP0C869 781 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms