RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 KIF5AQ12840 1032 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 CALCRLQ16602 461 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 VWA3BQ502W6 1294 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 HSP90B2PQ58FF3 399 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 UNC13DQ70J99 1090 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 OGFOD1Q8N543 542 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 CCDC155Q8N6L0 562 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 COG1Q8WTW3 980 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 LARP4BQ92615 738 aaKnown RBP11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 CCDC42Q96M95 316 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 NDST4Q9H3R1 872 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 SH2D4AQ9H788 454 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 SMARCAL1Q9NZC9 954 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 EHD2Q9NZN4 543 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 PLAGL2Q9UPG8 496 aa11.14□□□□□ -0.63
PRAMEF1-201ENST00000332296 SHTN1A0MZ66 631 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 TMEM88BA6NKF7 163 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 LRRC53A6NM62 1247 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 PDHBP11177 359 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 HNRNPH3P31942 346 aaKnown RBP11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 EIF4A3P38919 411 aaKnown RBP11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 AARSP49588 968 aaKnown RBP eCLIP11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 MRPS25P82663 173 aaKnown RBP11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 AMPD3Q01432 767 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 LRRC41Q15345 812 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 APOBEC3HQ6NTF7 200 aaKnown RBP11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 LRRC55Q6ZSA7 311 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 SV2BQ7L1I2 683 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 CREG2Q8IUH2 290 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 LRRC47Q8N1G4 583 aaKnown RBP11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 AGBL3Q8NEM8 1001 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 GJA10Q969M2 543 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 ZDHHC15Q96MV8 337 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 SELENOOQ9BVL4 669 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 IFIH1Q9BYX4 1025 aaKnown RBP11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 VIPAS39Q9H9C1 493 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 MED4Q9NPJ6 270 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 SALL4Q9UJQ4 1053 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 SNX12Q9UMY4 172 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 PCDHA13Q9Y5I0 950 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 ESYT2A0FGR8 921 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 PLCG2P16885 1265 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 PPP1R2P41236 205 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 HDLBPQ00341 1268 aaKnown RBP11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 SPA17Q15506 151 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 ECM1Q16610 540 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 MAN2A1Q16706 1144 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 C9orf131Q5VYM1 1079 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 CDC42EP5Q6NZY7 148 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 HDAC7Q8WUI4 952 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 BAP1Q92560 729 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 RPGRIP1Q96KN7 1286 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 PSMB7Q99436 277 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 MRIQ9BWK5 157 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 RIOX1Q9H6W3 641 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 MMRN2Q9H8L6 949 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 USP40Q9NVE5 1235 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 TMEM51Q9NW97 253 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 HDAC9Q9UKV0 1011 aa11.13□□□□□ -0.63
PRAMEF1-201ENST00000332296 NCK2O43639 380 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 NOVP48745 357 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 GMPSP49915 693 aaPredicted RBP11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 FXR2P51116 673 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 UBE2SQ16763 222 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 MAP9Q49MG5 647 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 NFRKBQ6P4R8 1299 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 LEKR1Q6ZMV7 388 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 SNX29Q8TEQ0 813 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 RAD54LQ92698 747 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 FGFBP2Q9BYJ0 223 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 TSGA10Q9BZW7 698 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 ACBD3Q9H3P7 528 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 ZNF287Q9HBT7 754 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 STK17AQ9UEE5 414 aa11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 FEZ2Q9UHY8 353 aaPredicted RBP11.12□□□□□ -0.63
PRAMEF1-201ENST00000332296 AGPSO00116 658 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 CXCR5P32302 372 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 GGCXP38435 758 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 ADCY7P51828 1080 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 CACNB3P54284 484 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 EHHADHQ08426 723 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 PICALMQ13492 652 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 TMEM119Q4V9L6 283 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 CCNI2Q6ZMN8 369 aaPredicted RBP11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 RRAGAQ7L523 313 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 CERS3Q8IU89 383 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 GUF1Q8N442 669 aaKnown RBP11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 ANKRD13CQ8N6S4 541 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 TRIM58Q8NG06 486 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 DDX12PQ92771 950 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 CDK5RAP3Q96JB5 506 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 PRMT6Q96LA8 375 aaPredicted RBP11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 PLEKHA4Q9H4M7 779 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 JRKLQ9Y4A0 524 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 PVALEFA0A1B0GWK0 134 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 GRIN3BO60391 1043 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 PPP1R11O60927 126 aaPredicted RBP11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 TACC1O75410 805 aa11.11□□□□□ -0.63
PRAMEF1-201ENST00000332296 LCA5LO95447 670 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms