RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 IL31RAQ8NI17 732 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 TRIM47Q96LD4 638 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 KCNF1Q9H3M0 494 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 TUFT1Q9NNX1 390 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.65□□□□□ -0.7
C11orf54-201ENST00000331239 PPME1Q9Y570 386 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 GAS7O60861 476 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 TBC1D8O95759 1140 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 NKX3-2P78367 333 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 FAM160A1Q05DH4 1040 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 EPHA7Q15375 998 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 LRCH2Q5VUJ6 765 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 CCDC73Q6ZRK6 1079 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 FTOQ9C0B1 505 aaKnown RBP eCLIP10.65□□□□□ -0.7
C11orf54-201ENST00000331239 LRRC27Q9C0I9 530 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 VAV3Q9UKW4 847 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 DOCK3Q8IZD9 2030 aa10.65□□□□□ -0.7
C11orf54-201ENST00000331239 WNT7AO00755 349 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 CTAGE5O15320 804 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 DHX15O43143 795 aaKnown RBP10.64□□□□□ -0.71
C11orf54-201ENST00000331239 RGS20O76081 388 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 LYPLA2O95372 231 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 PGK2P07205 417 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 KCNA2P16389 499 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 UBA7P41226 1012 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 ZNF165P49910 485 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 SPIRE1Q08AE8 756 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 KRT79Q5XKE5 535 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 CCDC62Q6P9F0 684 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 PRIMPOLQ96LW4 560 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 GTPBP4Q9BZE4 634 aaKnown RBP10.64□□□□□ -0.71
C11orf54-201ENST00000331239 KATNBL1Q9H079 304 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 DNAJC25Q9H1X3 360 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 STK17AQ9UEE5 414 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 LRWD1Q9UFC0 647 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 HOOK1Q9UJC3 728 aaKnown RBP10.64□□□□□ -0.71
C11orf54-201ENST00000331239 PEX10O60683 326 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 ATG7O95352 703 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 ARP10275 920 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 MARCKSP29966 332 aaPredicted RBP10.64□□□□□ -0.71
C11orf54-201ENST00000331239 LAMC2Q13753 1193 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 METTL7BQ6UX53 244 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 KIAA1524Q8TCG1 905 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 CALML4Q96GE6 196 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 CSRNP2Q9H175 543 aa10.64□□□□□ -0.71
C11orf54-201ENST00000331239 DDX41Q9UJV9 622 aaKnown RBP10.64□□□□□ -0.71
C11orf54-201ENST00000331239 VWA3AA6NCI4 1184 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 WDR64B1ANS9 1081 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 KINO60870 393 aaKnown RBP10.63□□□□□ -0.71
C11orf54-201ENST00000331239 SNAI1O95863 264 aaPredicted RBP10.63□□□□□ -0.71
C11orf54-201ENST00000331239 RPA1P27694 616 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 TXKP42681 527 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 ACVR2BQ13705 512 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 IL17AQ16552 155 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 SHC4Q6S5L8 630 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.63□□□□□ -0.71
C11orf54-201ENST00000331239 IQUBQ8NA54 791 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 SLAIN1Q8ND83 568 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 MYRIPQ8NFW9 859 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 NPLOC4Q8TAT6 608 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 PDCL3Q9H2J4 239 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 R3HDMLQ9H3Y0 253 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 PYCARDQ9ULZ3 195 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 SLC26A2P50443 739 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 ZNF75DP51815 510 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 STX1AQ16623 288 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 DUSP28Q4G0W2 176 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 TAPT1Q6NXT6 567 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 ENGASEQ8NFI3 743 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 CYP2W1Q8TAV3 490 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 GOLPH3LQ9H4A5 285 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 JPH1Q9HDC5 661 aaPredicted RBP10.63□□□□□ -0.71
C11orf54-201ENST00000331239 KCNH3Q9ULD8 1083 aa10.63□□□□□ -0.71
C11orf54-201ENST00000331239 KPNA6O60684 536 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 HOXD8P13378 290 aaPredicted RBP10.62□□□□□ -0.71
C11orf54-201ENST00000331239 PTGS1P23219 599 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 TECP42680 631 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 PKN2Q16513 984 aaKnown RBP10.62□□□□□ -0.71
C11orf54-201ENST00000331239 CELF3Q5SZQ8 465 aaKnown RBP10.62□□□□□ -0.71
C11orf54-201ENST00000331239 CNNM4Q6P4Q7 775 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 FSIP1Q8NA03 581 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 MAP7D2Q96T17 732 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 HSD17B14Q9BPX1 270 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 TRIM5Q9C035 493 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 SLC9A2Q9UBY0 812 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 FAM184BQ9ULE4 1060 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 PCDHA10Q9Y5I2 948 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 GH1P01241 217 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 P4HBP07237 508 aaKnown RBP10.62□□□□□ -0.71
C11orf54-201ENST00000331239 PSAPP07602 524 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 CTGFP29279 349 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 SYKP43405 635 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 FLT3LGP49771 235 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 UBXN2AP68543 259 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 MIS18BP1Q6P0N0 1132 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 CABP7Q86V35 215 aa10.62□□□□□ -0.71
C11orf54-201ENST00000331239 FMR1NBQ8N0W7 255 aaPredicted RBP10.62□□□□□ -0.71
C11orf54-201ENST00000331239 ZNF296Q8WUU4 475 aaPredicted RBP10.62□□□□□ -0.71
C11orf54-201ENST00000331239 SYMPKQ92797 1274 aaKnown RBP10.62□□□□□ -0.71
C11orf54-201ENST00000331239 KCND2Q9NZV8 630 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms