RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 HLA-DPA1P20036 260 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 ARHGAP25P42331 645 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 IFT88Q13099 833 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 FAM26FQ5R3K3 315 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 SYCP2LQ5T4T6 812 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 MAP7D3Q8IWC1 876 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 FAM186BQ8IYM0 893 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 IFT43Q96FT9 208 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 PRAMEF22A3QJZ6 481 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 CFAP69A5D8W1 941 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 GCKP35557 465 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 DAB2P98082 770 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 MAP3K21Q5TCX8 1036 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 FAM117BQ6P1L5 589 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 LZICQ8WZA0 190 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 RASIP1Q5U651 963 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 SYDE2Q5VT97 1194 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 TWF2Q6IBS0 349 aaKnown RBP11.4□□□□□ -0.58
CLN8-201ENST00000331222 CEP19Q96LK0 163 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 ACCSQ96QU6 501 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 HIP1RO75146 1068 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 EIF4A1P60842 406 aaKnown RBP11.4□□□□□ -0.58
CLN8-201ENST00000331222 RBL2Q08999 1139 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 IMPG1Q17R60 797 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 GLE1Q53GS7 698 aaKnown RBP11.4□□□□□ -0.58
CLN8-201ENST00000331222 HS1BP3Q53T59 392 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 TUBGCP2Q9BSJ2 902 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 POLR3AO14802 1390 aaPredicted RBP11.4□□□□□ -0.58
CLN8-201ENST00000331222 SOS2Q07890 1332 aaPredicted RBP11.4□□□□□ -0.58
CLN8-201ENST00000331222 PSMC5P62195 406 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 PPHLN1Q8NEY8 458 aaKnown RBP11.4□□□□□ -0.58
CLN8-201ENST00000331222 DSCC1Q9BVC3 393 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 NEUROG2Q9H2A3 272 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 HOMER3Q9NSC5 361 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 ADD3Q9UEY8 706 aaKnown RBP11.4□□□□□ -0.58
CLN8-201ENST00000331222 ZSCAN9O15535 394 aaPredicted RBP11.4□□□□□ -0.58
CLN8-201ENST00000331222 CCT5P48643 541 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 PKP1Q13835 747 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 RBBP7Q16576 425 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 DDX53Q86TM3 631 aaKnown RBP11.4□□□□□ -0.58
CLN8-201ENST00000331222 PGBD3Q8N328 593 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 ARHGEF1Q92888 912 aaKnown RBP11.4□□□□□ -0.58
CLN8-201ENST00000331222 ATXN7L3BQ96GX2 97 aa11.4□□□□□ -0.58
CLN8-201ENST00000331222 ADCY9O60503 1353 aa11.4□□□□□ -0.59
CLN8-201ENST00000331222 ANP32DO95626 131 aa11.4□□□□□ -0.59
CLN8-201ENST00000331222 CASP14P31944 242 aa11.4□□□□□ -0.59
CLN8-201ENST00000331222 NGRNQ9NPE2 291 aaKnown RBP11.4□□□□□ -0.59
CLN8-201ENST00000331222 GINM1Q9NU53 330 aa11.4□□□□□ -0.59
CLN8-201ENST00000331222 NRBP1Q9UHY1 535 aa11.4□□□□□ -0.59
CLN8-201ENST00000331222 PDCD2Q16342 344 aaPredicted RBP11.39□□□□□ -0.59
CLN8-201ENST00000331222 GLYCTKQ8IVS8 523 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 THNSL1Q8IYQ7 743 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 SMAD5Q99717 465 aaKnown RBP11.39□□□□□ -0.59
CLN8-201ENST00000331222 AMNQ9BXJ7 453 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 INTS9Q9NV88 658 aaKnown RBP11.39□□□□□ -0.59
CLN8-201ENST00000331222 SAMD9Q5K651 1589 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 AFPP02771 609 aaKnown RBP11.39□□□□□ -0.59
CLN8-201ENST00000331222 TUBBP07437 444 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 IREB2P48200 963 aaKnown RBP11.39□□□□□ -0.59
CLN8-201ENST00000331222 TMED1Q13445 227 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 BCAS4Q8TDM0 211 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 ZFYVE19Q96K21 471 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 FSD1LQ9BXM9 530 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 MIS12Q9H081 205 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 Q9H521 79 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 PDE11AQ9HCR9 933 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 ADAMTS12P58397 1594 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 CYP27A1Q02318 531 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 AGR3Q8TD06 166 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 FAF2Q96CS3 445 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 MSTO1Q9BUK6 570 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 ATP6V0A1Q93050 837 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 NACC1Q96RE7 527 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 KCNG1Q9UIX4 513 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 MED7O43513 233 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 ACSL3O95573 720 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 SYF2O95926 243 aaKnown RBP11.39□□□□□ -0.59
CLN8-201ENST00000331222 BMP3P12645 472 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 COPB1P53618 953 aaKnown RBP11.39□□□□□ -0.59
CLN8-201ENST00000331222 AOC3Q16853 763 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 WHAMMP3Q1A5X7 153 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 PHLDB3Q6NSJ2 640 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 RFX8Q6ZV50 586 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 TCP11Q8WWU5 503 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 LARP4BQ92615 738 aaKnown RBP11.39□□□□□ -0.59
CLN8-201ENST00000331222 RAVER2Q9HCJ3 691 aaKnown RBP11.39□□□□□ -0.59
CLN8-201ENST00000331222 SAMSN1Q9NSI8 373 aaKnown RBP11.39□□□□□ -0.59
CLN8-201ENST00000331222 EFCAB8A8MWE9 144 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 PSMA2P25787 234 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 SLC35F6Q8N357 371 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 SPTLC3Q9NUV7 552 aa11.39□□□□□ -0.59
CLN8-201ENST00000331222 ATP8B3O60423 1300 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 COL17A1Q9UMD9 1497 aaPredicted RBP11.38□□□□□ -0.59
CLN8-201ENST00000331222 H2AFZP0C0S5 128 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 PI16Q6UXB8 463 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 H2AFVQ71UI9 128 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 HPCAL4Q9UM19 191 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 CYFIP1Q7L576 1253 aa11.38□□□□□ -0.59
CLN8-201ENST00000331222 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
CLN8-201ENST00000331222 RHPN2Q8IUC4 686 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms