RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 PALLDQ8WX93 1383 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 CCDC188H7C350 402 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 DLATP10515 647 aaKnown RBP15.24■□□□□ 0.03
EPHB3-201ENST00000330394 LMNB1P20700 586 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 RFX5P48382 616 aaPredicted RBP15.24■□□□□ 0.03
EPHB3-201ENST00000330394 PDE6CP51160 858 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 MFSD14BQ5SR56 506 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 ODR4Q5SWX8 454 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 STAG2Q8N3U4 1231 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 THRAP3Q9Y2W1 955 aaKnown RBP15.24■□□□□ 0.03
EPHB3-201ENST00000330394 CAPN6Q9Y6Q1 641 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 WDR19Q8NEZ3 1342 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 PFKFB3Q16875 520 aaPredicted RBP15.24■□□□□ 0.03
EPHB3-201ENST00000330394 RFX7Q2KHR2 1363 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 SRRM1Q8IYB3 904 aaKnown RBP15.24■□□□□ 0.03
EPHB3-201ENST00000330394 CDHR2Q9BYE9 1310 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 PCIF1Q9H4Z3 704 aa15.24■□□□□ 0.03
EPHB3-201ENST00000330394 PLEKHG1Q9ULL1 1385 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 I3L4J1 428 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 WDR93Q6P2C0 686 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 PALM2Q8IXS6 379 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 CPXCR1Q8N123 301 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 ZNF653Q96CK0 615 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 TSNARE1Q96NA8 513 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 ETNK1Q9HBU6 452 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 TCHHQ07283 1943 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.23■□□□□ 0.03
EPHB3-201ENST00000330394 DIAPH2O60879 1101 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 ECEL1O95672 775 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 SRGNP10124 158 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 UBXN2AP68543 259 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 KCNH2Q12809 1159 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 SRBD1Q8N5C6 995 aaKnown RBP15.23■□□□□ 0.03
EPHB3-201ENST00000330394 HDAC7Q8WUI4 952 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 PITPNM3Q9BZ71 974 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 SLC40A1Q9NP59 571 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.23■□□□□ 0.03
EPHB3-201ENST00000330394 CPDO75976 1380 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 GAS7O60861 476 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 PLA2G4BP0C869 781 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 CA4P22748 312 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 MSH2P43246 934 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 PPP2R5DQ14738 602 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 C6orf118Q5T5N4 469 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 NSMFQ6X4W1 530 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 TRAPPC11Q7Z392 1133 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 MDM1Q8TC05 714 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 CYFIP2Q96F07 1278 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 MAK16Q9BXY0 300 aaKnown RBP15.23■□□□□ 0.03
EPHB3-201ENST00000330394 PNMA2Q9UL42 364 aa15.23■□□□□ 0.03
EPHB3-201ENST00000330394 CD19P15391 556 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 TOB1P50616 345 aaPredicted RBP15.22■□□□□ 0.03
EPHB3-201ENST00000330394 ARHGEF18Q6ZSZ5 1173 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 UNC13DQ70J99 1090 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 CCDC89Q8N998 374 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 KIFC2Q96AC6 838 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 TSC22D3Q99576 134 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 ADAM33Q9BZ11 813 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 NOC2LQ9Y3T9 749 aaKnown RBP15.22■□□□□ 0.03
EPHB3-201ENST00000330394 ITIH6Q6UXX5 1313 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 NRKQ7Z2Y5 1582 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 TTI1O43156 1089 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 EVI5O60447 810 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 PRDX5P30044 214 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 CAPRIN2Q6IMN6 1127 aaKnown RBP15.22■□□□□ 0.03
EPHB3-201ENST00000330394 KCTD1Q719H9 257 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 TRIM9Q9C026 710 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 SH2D4AQ9H788 454 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 CEP72Q9P209 647 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 RTCBQ9Y3I0 505 aaKnown RBP15.22■□□□□ 0.03
EPHB3-201ENST00000330394 RAD51CO43502 376 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 TNNI1P19237 187 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 BSPRYQ5W0U4 402 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 TRIM51Q9BSJ1 452 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 ZSCAN5CA6NGD5 496 aaPredicted RBP15.22■□□□□ 0.03
EPHB3-201ENST00000330394 E9PMD0 336 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 ANAPC5Q9UJX4 755 aa15.22■□□□□ 0.03
EPHB3-201ENST00000330394 K7ENM7 598 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 PCP11498 1178 aaKnown RBP15.21■□□□□ 0.03
EPHB3-201ENST00000330394 BTDP43251 543 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 SMTNP53814 917 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 GTF2IP78347 998 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 HP1BP3Q5SSJ5 553 aaPredicted RBP15.21■□□□□ 0.03
EPHB3-201ENST00000330394 KIF2BQ8N4N8 673 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.21■□□□□ 0.03
EPHB3-201ENST00000330394 SEC16BQ96JE7 1060 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 TMEM260Q9NX78 707 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 RABGAP1Q9Y3P9 1069 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 SETBP1Q9Y6X0 1596 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 ADGRB1O14514 1584 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 MECOMQ03112 1051 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 CASC4Q6P4E1 433 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 ANKRD35Q8N283 1001 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 CYTH2Q99418 400 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 MAP3K14Q99558 947 aa15.21■□□□□ 0.03
EPHB3-201ENST00000330394 PMS2P54278 862 aa15.21■□□□□ 0.02
EPHB3-201ENST00000330394 MYL7Q01449 175 aa15.21■□□□□ 0.02
EPHB3-201ENST00000330394 TRAF1Q13077 416 aa15.21■□□□□ 0.02
EPHB3-201ENST00000330394 PTGISQ16647 500 aa15.21■□□□□ 0.02
EPHB3-201ENST00000330394 UBE2TQ9NPD8 197 aaPredicted RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms