RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 EHHADHQ08426 723 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 SCFD1Q8WVM8 642 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 TLR10Q9BXR5 811 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 PACSIN1Q9BY11 444 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 SWAP70Q9UH65 585 aa15.48■□□□□ 0.07
ATP2C1-201ENST00000328560 IGKV6D-41A0A0C4DH26 115 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 POLRMTO00411 1230 aaKnown RBP15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 TRIM66O15016 1216 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 CYP11B2P19099 503 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 NOVP48745 357 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 HGSNATQ68CP4 663 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 TTC19Q6DKK2 380 aaPredicted RBP15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 SLC30A10Q6XR72 485 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 PROM2Q8N271 834 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 SPAG5Q96R06 1193 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 CEP72Q9P209 647 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 FAM184BQ9ULE4 1060 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 CETN3O15182 167 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 NOL4O94818 638 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 KLRC1P26715 233 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 PDE6BP35913 854 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 CASP5P51878 434 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 MUM1L1Q5H9M0 696 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 RUFY1Q96T51 708 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 GOLPH3Q9H4A6 298 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 VIPAS39Q9H9C1 493 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 SUGT1Q9Y2Z0 365 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 KDM3AQ9Y4C1 1321 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 A0A087X0T9 212 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 PRPF6O94906 941 aaKnown RBP15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 FAM228BP0C875 321 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 NPR1P16066 1061 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 GCFC2P16383 781 aaKnown RBP15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 HOXA13P31271 388 aaPredicted RBP15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 NOP2P46087 812 aaKnown RBP15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 SEPT2Q15019 361 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 KLHDC7AQ5VTJ3 777 aa15.47■□□□□ 0.07
ATP2C1-201ENST00000328560 GOLGA6CA6NDK9 693 aa15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 SERPING1P05155 500 aa15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 GOLGA6DP0CG33 693 aa15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 CLK2P49760 499 aaKnown RBP15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 KCNH2Q12809 1159 aa15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 CERKLQ49MI3 558 aaPredicted RBP15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 ZCWPW2Q504Y3 356 aa15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 LUC7LQ9NQ29 371 aaKnown RBP15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 GOLGA6AQ9NYA3 693 aa15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 ZSCAN5CA6NGD5 496 aaPredicted RBP15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 SFI1A8K8P3 1242 aa15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 ZNF76P36508 570 aa15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 ASIC2Q16515 512 aa15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 PPP1R18Q6NYC8 613 aa15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 MMGT1Q8N4V1 131 aa15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 BCAS3Q9H6U6 928 aa15.46■□□□□ 0.07
ATP2C1-201ENST00000328560 BTAF1O14981 1849 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 SLC9A1P19634 815 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 HSPA1LP34931 641 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 PPARDQ03181 441 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 SPICE1Q8N0Z3 855 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 MSL3Q8N5Y2 521 aaKnown RBP15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 ARHGAP4P98171 946 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 CFAP221Q4G0U5 840 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 APOBEC3HQ6NTF7 200 aaKnown RBP15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 SFR1Q86XK3 245 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 FAM76AQ8TAV0 307 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 STIM2Q9P246 746 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 EP400Q96L91 3159 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 SSU72P8A0A1W2PR75 194 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 AGPSO00116 658 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 CLIC2O15247 247 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 CRKP46108 304 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 ASTE1Q2TB18 679 aaPredicted RBP15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 LRRC31Q6UY01 552 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 CATSPER3Q86XQ3 398 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 TRIM59Q8IWR1 403 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 DHX36Q9H2U1 1008 aaKnown RBP15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 DNM3Q9UQ16 869 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 ABCB11O95342 1321 aa15.45■□□□□ 0.06
ATP2C1-201ENST00000328560 MYH1P12882 1939 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 DDTLA6NHG4 134 aaPredicted RBP15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 SPDYE3A6NKU9 549 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 IVLP07476 585 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 MMP10P09238 476 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 AARSP49588 968 aaKnown RBP eCLIP15.44■□□□□ 0.061e-6■■■■■ 36.1
ATP2C1-201ENST00000328560 GUCY2FP51841 1108 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 GUCY2DQ02846 1103 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 ARSHQ5FYA8 562 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 HAUS3Q68CZ6 603 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 MSL1Q68DK7 614 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 KLHL7Q8IXQ5 586 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 HDAC9Q9UKV0 1011 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 RRP15Q9Y3B9 282 aaKnown RBP15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 RSPH10B2B2RC85 870 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 APBA3O96018 575 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 RSPH10BP0C881 870 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 PROCA1Q8NCQ7 364 aaPredicted RBP15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 CYP2W1Q8TAV3 490 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 CCDC17Q96LX7 622 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 CEP63Q96MT8 703 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 KRT12Q99456 494 aa15.44■□□□□ 0.06
ATP2C1-201ENST00000328560 DNAJC18Q9H819 358 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms