RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 ANKIB1Q9P2G1 1089 aa16.02■□□□□ 0.16
SSBP3-201ENST00000326956 ESYT2A0FGR8 921 aa16.02■□□□□ 0.15
SSBP3-201ENST00000326956 ITGB3BPQ13352 177 aaPredicted RBP16.02■□□□□ 0.15
SSBP3-201ENST00000326956 HERC4Q5GLZ8 1057 aaPredicted RBP16.02■□□□□ 0.15
SSBP3-201ENST00000326956 EMC10Q5UCC4 262 aa16.02■□□□□ 0.15
SSBP3-201ENST00000326956 KCNK18Q7Z418 384 aa16.02■□□□□ 0.15
SSBP3-201ENST00000326956 CCDC114Q96M63 670 aa16.02■□□□□ 0.15
SSBP3-201ENST00000326956 PHLPP1O60346 1717 aa16.02■□□□□ 0.15
SSBP3-201ENST00000326956 FOXR2Q6PJQ5 311 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 hCG_1984214I3L0E3 225 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 CETN3O15182 167 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 KIF4AO95239 1232 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 HSD17B3P37058 310 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 ADAM9Q13443 819 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 PTPROQ16827 1216 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 C10orf76Q5T2E6 689 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 NBPF5PQ86XG9 351 aaPredicted RBP16.01■□□□□ 0.15
SSBP3-201ENST00000326956 ZNF713Q8N859 430 aaPredicted RBP16.01■□□□□ 0.15
SSBP3-201ENST00000326956 NYXQ9GZU5 481 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 ROBO3Q96MS0 1386 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 SMARCA1P28370 1054 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 FNTAP49354 379 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 MTMR3Q13615 1198 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 FRMPD2Q68DX3 1309 aaPredicted RBP16.01■□□□□ 0.15
SSBP3-201ENST00000326956 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 NEDD1Q8NHV4 660 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 PAGR1Q9BTK6 254 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 AP1M1Q9BXS5 423 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 AIPL1Q9NZN9 384 aa16.01■□□□□ 0.15
SSBP3-201ENST00000326956 KIAA1551Q9HCM1 1747 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 SCN7AQ01118 1682 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 LOC102724159A0A0B4J2E5 919 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 USP17L5A8MUK1 530 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 PGRMC1O00264 195 aaKnown RBP16■□□□□ 0.15
SSBP3-201ENST00000326956 ERVK-9P63128 1117 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 PWP2Q15269 919 aaKnown RBP16■□□□□ 0.15
SSBP3-201ENST00000326956 TRIM59Q8IWR1 403 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 OR2W6PQ8NHA6 318 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 CEP95Q96GE4 821 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 JPH2Q9BR39 696 aaPredicted RBP16■□□□□ 0.15
SSBP3-201ENST00000326956 NT5C3AQ9H0P0 336 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 XIRP1Q702N8 1843 aaKnown RBP16■□□□□ 0.15
SSBP3-201ENST00000326956 GMNCA6NCL1 334 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 SRRM3A6NNA2 597 aaPredicted RBP16■□□□□ 0.15
SSBP3-201ENST00000326956 KRIT1O00522 736 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 BIRC3Q13489 604 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 TMEM119Q4V9L6 283 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 VPS36Q86VN1 386 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 EIF1ADQ8N9N8 165 aaKnown RBP16■□□□□ 0.15
SSBP3-201ENST00000326956 LMBR1Q8WVP7 490 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 CYFIP2Q96F07 1278 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 SETDB2Q96T68 719 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 DDX25Q9UHL0 483 aaKnown RBP16■□□□□ 0.15
SSBP3-201ENST00000326956 PCDHA12Q9UN75 941 aa16■□□□□ 0.15
SSBP3-201ENST00000326956 CES2O00748 559 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 SART1O43290 800 aaKnown RBP15.99■□□□□ 0.15
SSBP3-201ENST00000326956 USP11P51784 963 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 ACTN3Q08043 901 aaPredicted RBP15.99■□□□□ 0.15
SSBP3-201ENST00000326956 ZCWPW2Q504Y3 356 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 PEX26Q7Z412 305 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 DDX42Q86XP3 938 aaKnown RBP eCLIP15.99■□□□□ 0.15
SSBP3-201ENST00000326956 TEX11Q8IYF3 940 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 CCDC26Q8TAB7 109 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 VCPKMTQ9H867 229 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 GGA2Q9UJY4 613 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 BZW2Q9Y6E2 419 aaKnown RBP15.99■□□□□ 0.15
SSBP3-201ENST00000326956 CCDC88AQ3V6T2 1871 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 IFFO1Q0D2I5 559 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 KCNH2Q12809 1159 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 DRP2Q13474 957 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 SLC10A5Q5PT55 438 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 DNAJC19Q96DA6 116 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 GOLPH3Q9H4A6 298 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 EMILIN3Q9NT22 766 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 ABCA3Q99758 1704 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 KDM3AQ9Y4C1 1321 aa15.99■□□□□ 0.15
SSBP3-201ENST00000326956 CHUKO15111 745 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 FLOT1O75955 427 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 PPP4CP60510 307 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
SSBP3-201ENST00000326956 TBC1D9BQ66K14 1250 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 ALKBH5Q6P6C2 394 aaKnown RBP15.98■□□□□ 0.15
SSBP3-201ENST00000326956 GPBP1Q86WP2 473 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 CCDC13Q8IYE1 715 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 DDX47Q9H0S4 455 aaKnown RBP15.98■□□□□ 0.15
SSBP3-201ENST00000326956 ACTR5Q9H9F9 607 aaPredicted RBP15.98■□□□□ 0.15
SSBP3-201ENST00000326956 KLC4Q9NSK0 619 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 LAMB2P55268 1798 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 CCDC188H7C350 402 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 PTK2Q05397 1052 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 PLCB4Q15147 1175 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 C16orf86Q6ZW13 317 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 CALR3Q96L12 384 aaKnown RBP15.98■□□□□ 0.15
SSBP3-201ENST00000326956 FBXL5Q9UKA1 691 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 KIAA1024Q9UPX6 916 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 NR2F2P24468 414 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 BTDP43251 543 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 SMTNP53814 917 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 KRT71Q3SY84 523 aa15.98■□□□□ 0.15
SSBP3-201ENST00000326956 ACTRT1Q8TDG2 376 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms