RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 GLT8D2Q9H1C3 349 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 ERAP1Q9NZ08 941 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 PCDHA6Q9UN73 950 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 PCDHA8Q9Y5H6 950 aa20.3■□□□□ 0.84
PTPMT1-201ENST00000326656 LCHNA4D1U4 455 aa20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 EPOPA6NHQ4 379 aa20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 ATP9AO75110 1047 aa20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 FOSP01100 380 aaPredicted RBP20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 RPLP2P05387 115 aaKnown RBP20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 TCF7P36402 384 aaPredicted RBP20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 GRB10Q13322 594 aa20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 UTP14CQ5TAP6 766 aaKnown RBP20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 PPP1R18Q6NYC8 613 aa20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 TAF2Q6P1X5 1199 aa20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 APBB2Q92870 758 aa20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 TGS1Q96RS0 853 aaKnown RBP20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 JADE2Q9NQC1 790 aa20.29■□□□□ 0.84
PTPMT1-201ENST00000326656 MICAL3Q7RTP6 2002 aa20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 ZBTB43O43298 467 aa20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 LPXNO60711 386 aa20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 HTRA4P83105 476 aaPredicted RBP20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 ARHGAP4P98171 946 aa20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 HEATR3Q7Z4Q2 680 aa20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 TRIM50Q86XT4 487 aa20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 MICALL1Q8N3F8 863 aa20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 ADAMTS19Q8TE59 1207 aa20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 LMBR1Q8WVP7 490 aa20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 TNPO1Q92973 898 aaKnown RBP20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 SMARCAD1Q9H4L7 1026 aa20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 RAPGEFL1Q9UHV5 662 aa20.28■□□□□ 0.84
PTPMT1-201ENST00000326656 GSTTP1A0A1W2PQM5 241 aa20.27■□□□□ 0.84
PTPMT1-201ENST00000326656 hCG_1642624A0A1W2PR95 340 aa20.27■□□□□ 0.84
PTPMT1-201ENST00000326656 LINC01553A4QN01 128 aa20.27■□□□□ 0.84
PTPMT1-201ENST00000326656 CDC45O75419 566 aa20.27■□□□□ 0.84
PTPMT1-201ENST00000326656 BMP1P13497 986 aa20.27■□□□□ 0.84
PTPMT1-201ENST00000326656 UBE2SQ16763 222 aa20.27■□□□□ 0.84
PTPMT1-201ENST00000326656 RTN1Q16799 776 aa20.27■□□□□ 0.84
PTPMT1-201ENST00000326656 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.27■□□□□ 0.84
PTPMT1-201ENST00000326656 TMCO2Q7Z6W1 182 aaPredicted RBP20.27■□□□□ 0.84
PTPMT1-201ENST00000326656 RSPH3Q86UC2 560 aa20.27■□□□□ 0.84
PTPMT1-201ENST00000326656 RIC8AQ9NPQ8 531 aa20.27■□□□□ 0.84
PTPMT1-201ENST00000326656 SP4Q02446 784 aa20.26■□□□□ 0.83
PTPMT1-201ENST00000326656 FUT2Q10981 343 aa20.26■□□□□ 0.83
PTPMT1-201ENST00000326656 SKIV2LQ15477 1246 aaKnown RBP20.26■□□□□ 0.83
PTPMT1-201ENST00000326656 RAB11FIP4Q86YS3 637 aa20.26■□□□□ 0.83
PTPMT1-201ENST00000326656 SP7Q8TDD2 431 aaPredicted RBP20.26■□□□□ 0.83
PTPMT1-201ENST00000326656 TOP1MTQ969P6 601 aa20.26■□□□□ 0.83
PTPMT1-201ENST00000326656 SAMD11Q96NU1 681 aa20.26■□□□□ 0.83
PTPMT1-201ENST00000326656 SUGCTQ9HAC7 445 aa20.26■□□□□ 0.83
PTPMT1-201ENST00000326656 BRPF3Q9ULD4 1205 aa20.26■□□□□ 0.83
PTPMT1-201ENST00000326656 V9GY48 417 aaPredicted RBP20.26■□□□□ 0.83
PTPMT1-201ENST00000326656 CCDC196A0A1B0GTZ2 297 aa20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 RRN3P2A6NIE6 340 aa20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 NAPAP54920 295 aa20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 WWC2Q6AWC2 1192 aa20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 RASEFQ8IZ41 740 aa20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 MYOCDQ8IZQ8 938 aa20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 GLG1Q92896 1179 aa20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 UHRF1Q96T88 793 aaPredicted RBP20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 MXRA8Q9BRK3 442 aa20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 KCNH7Q9NS40 1196 aa20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 TELO2Q9Y4R8 837 aa20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 NFASCO94856 1347 aa20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 CNTNAP5Q8WYK1 1306 aa20.25■□□□□ 0.83
PTPMT1-201ENST00000326656 MBLAC1A4D2B0 266 aaPredicted RBP20.24■□□□□ 0.83
PTPMT1-201ENST00000326656 ADCY7P51828 1080 aa20.24■□□□□ 0.83
PTPMT1-201ENST00000326656 PPFIA1Q13136 1202 aa20.24■□□□□ 0.83
PTPMT1-201ENST00000326656 AP3B2Q13367 1082 aa20.24■□□□□ 0.83
PTPMT1-201ENST00000326656 FAM43BQ6ZT52 329 aaPredicted RBP20.24■□□□□ 0.83
PTPMT1-201ENST00000326656 KCNB2Q92953 911 aa20.24■□□□□ 0.83
PTPMT1-201ENST00000326656 HLA-CQ95604 372 aa20.24■□□□□ 0.83
PTPMT1-201ENST00000326656 IFIH1Q9BYX4 1025 aaKnown RBP20.24■□□□□ 0.83
PTPMT1-201ENST00000326656 JPH1Q9HDC5 661 aaPredicted RBP20.24■□□□□ 0.83
PTPMT1-201ENST00000326656 BARHL2Q9NY43 387 aa20.24■□□□□ 0.83
PTPMT1-201ENST00000326656 SIP14410 1827 aa20.24■□□□□ 0.83
PTPMT1-201ENST00000326656 CTSHP09668 335 aa20.23■□□□□ 0.83
PTPMT1-201ENST00000326656 COL9A1P20849 921 aa20.23■□□□□ 0.83
PTPMT1-201ENST00000326656 GRIK4Q16099 956 aa20.23■□□□□ 0.83
PTPMT1-201ENST00000326656 ADCK5Q3MIX3 580 aa20.23■□□□□ 0.83
PTPMT1-201ENST00000326656 CEP55Q53EZ4 464 aa20.23■□□□□ 0.83
PTPMT1-201ENST00000326656 MCTP2Q6DN12 878 aa20.23■□□□□ 0.83
PTPMT1-201ENST00000326656 FAM117BQ6P1L5 589 aa20.23■□□□□ 0.83
PTPMT1-201ENST00000326656 PLPPR4Q7Z2D5 763 aa20.23■□□□□ 0.83
PTPMT1-201ENST00000326656 SDF4Q9BRK5 362 aa20.23■□□□□ 0.83
PTPMT1-201ENST00000326656 AZI2Q9H6S1 392 aa20.23■□□□□ 0.83
PTPMT1-201ENST00000326656 SLC9A2Q9UBY0 812 aa20.23■□□□□ 0.83
PTPMT1-201ENST00000326656 TUBE1Q9UJT0 475 aa20.23■□□□□ 0.83
PTPMT1-201ENST00000326656 KLF18A0A0U1RQI7 1052 aa20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 SMCO2A6NFE2 343 aa20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 MEIS1O00470 390 aa20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 CHRNA1P02708 482 aa20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 TFF2Q03403 129 aa20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 KRT40Q6A162 431 aa20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 TYW1BQ6NUM6 668 aa20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 NIPA1Q7RTP0 329 aa20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 SPRED2Q7Z698 418 aa20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 FBXL16Q8N461 479 aa20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 FAM217BQ9NTX9 383 aaPredicted RBP20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 SQORQ9Y6N5 450 aa20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 COL4A6Q14031 1691 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms