RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 NOGQ13253 232 aa14.27□□□□□ -0.12
DDX39A-202ENST00000324340 SEMA3FQ13275 785 aa14.27□□□□□ -0.12
DDX39A-202ENST00000324340 PNOCQ13519 176 aa14.27□□□□□ -0.12
DDX39A-202ENST00000324340 GNPTABQ3T906 1256 aa14.27□□□□□ -0.12
DDX39A-202ENST00000324340 CYP4F22Q6NT55 531 aa14.27□□□□□ -0.12
DDX39A-202ENST00000324340 GPR142Q7Z601 462 aa14.27□□□□□ -0.12
DDX39A-202ENST00000324340 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.12
DDX39A-202ENST00000324340 RASSF8Q8NHQ8 419 aa14.27□□□□□ -0.12
DDX39A-202ENST00000324340 UIMC1Q96RL1 719 aa14.27□□□□□ -0.12
DDX39A-202ENST00000324340 HSD17B14Q9BPX1 270 aa14.27□□□□□ -0.12
DDX39A-202ENST00000324340 POLR3CQ9BUI4 534 aaPredicted RBP14.27□□□□□ -0.12
DDX39A-202ENST00000324340 BLOC1S4Q9NUP1 217 aa14.27□□□□□ -0.12
DDX39A-202ENST00000324340 PCDHA5Q9Y5H7 936 aa14.27□□□□□ -0.12
DDX39A-202ENST00000324340 EML1O00423 815 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 ATP9AO75110 1047 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 PRR29P0C7W0 189 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 SPATA31C1P0DKV0 1188 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 MUTP22033 750 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 CCT6AP40227 531 aaKnown RBP14.26□□□□□ -0.13
DDX39A-202ENST00000324340 DPYDQ12882 1025 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 GRB14Q14449 540 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 DEFB115Q30KQ5 88 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 ZNF792Q3KQV3 632 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 WDR78Q5VTH9 848 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 NCAPH2Q6IBW4 605 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 ZNF467Q7Z7K2 595 aaPredicted RBP14.26□□□□□ -0.13
DDX39A-202ENST00000324340 ERCC4Q92889 916 aaPredicted RBP14.26□□□□□ -0.13
DDX39A-202ENST00000324340 ZIC5Q96T25 663 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 UNC45AQ9H3U1 944 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 ZFYVE28Q9HCC9 887 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 CPA4Q9UI42 421 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 DIS3Q9Y2L1 958 aaKnown RBP14.26□□□□□ -0.13
DDX39A-202ENST00000324340 IVNS1ABPQ9Y6Y0 642 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 NFASCO94856 1347 aa14.26□□□□□ -0.13
DDX39A-202ENST00000324340 SMTNL1A8MU46 457 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 CA12O43570 354 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 GTPBP6O43824 516 aaPredicted RBP14.25□□□□□ -0.13
DDX39A-202ENST00000324340 COBLO75128 1261 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 MED24O75448 989 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 ALDH1A1P00352 501 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 KCNA2P16389 499 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 ADORA2AP29274 412 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 PDE4DQ08499 809 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 EPHA7Q15375 998 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 ECM1Q16610 540 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 PLEKHH3Q7Z736 793 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 CATSPER3Q86XQ3 398 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 GRAMD1CQ8IYS0 662 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 NEK9Q8TD19 979 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 CDK5RAP3Q96JB5 506 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 SENP7Q9BQF6 1050 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 EIF2AK1Q9BQI3 630 aaKnown RBP14.25□□□□□ -0.13
DDX39A-202ENST00000324340 TUFT1Q9NNX1 390 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 CALCOCO1Q9P1Z2 691 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 DDX41Q9UJV9 622 aaKnown RBP14.25□□□□□ -0.13
DDX39A-202ENST00000324340 PAXBP1Q9Y5B6 917 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 CEP350Q5VT06 3117 aa14.25□□□□□ -0.13
DDX39A-202ENST00000324340 SLC15A5A6NIM6 579 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 ASB14A6NK59 587 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 SMC2O95347 1197 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 ADCY5O95622 1261 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 CAVIN2O95810 425 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 AFMP43652 599 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 KRT76Q01546 638 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 CRHR2Q13324 411 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 ZRSR1Q15695 479 aaKnown RBP14.24□□□□□ -0.13
DDX39A-202ENST00000324340 STX1AQ16623 288 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 CNNM4Q6P4Q7 775 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 ZNF771Q7L3S4 317 aaPredicted RBP14.24□□□□□ -0.13
DDX39A-202ENST00000324340 KCNK18Q7Z418 384 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 TRIML1Q8N9V2 468 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 RDM1Q8NG50 284 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 LARP4BQ92615 738 aaKnown RBP14.24□□□□□ -0.13
DDX39A-202ENST00000324340 RAD54LQ92698 747 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 CAPNS2Q96L46 248 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 GSDMAQ96QA5 445 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 PLIN2Q99541 437 aa14.24□□□□□ -0.13
DDX39A-202ENST00000324340 POTEB3A0JP26 581 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 SLITRK3O94933 977 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 TGFB3P10600 412 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 HSPA6P17066 643 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 SFNP31947 248 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 NLRP12P59046 1061 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 MORN1Q5T089 497 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 ZNF746Q6NUN9 644 aaPredicted RBP14.23□□□□□ -0.13
DDX39A-202ENST00000324340 POTEBQ6S5H4 581 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 MAMDC4Q6UXC1 1216 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 PAXIP1Q6ZW49 1069 aaPredicted RBP14.23□□□□□ -0.13
DDX39A-202ENST00000324340 SMARCE1Q969G3 411 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 C7orf25Q9BPX7 421 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 ANO10Q9NW15 660 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 KIAA1024Q9UPX6 916 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 THSD7BQ9C0I4 1608 aa14.23□□□□□ -0.13
DDX39A-202ENST00000324340 CHMP2AO43633 222 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 CCNE2O96020 404 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 CDK11BP21127 795 aaKnown RBP14.22□□□□□ -0.13
DDX39A-202ENST00000324340 JAK3P52333 1124 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 AMPD3Q01432 767 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 CUL4BQ13620 913 aa14.22□□□□□ -0.13
DDX39A-202ENST00000324340 MORC3Q14149 939 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 1336 ms