RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 USP17L1Q7RTZ2 530 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 HVCN1Q96D96 273 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 STX8Q9UNK0 236 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 SMCO2A6NFE2 343 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 KIF4AO95239 1232 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 MTMR3Q13615 1198 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 ASIC2Q16515 512 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 TBCKQ8TEA7 893 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 RIC8AQ9NPQ8 531 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 COL22A1Q8NFW1 1626 aaPredicted RBP19.59■□□□□ 0.73
PRKCB-202ENST00000321728 DAPK3O43293 454 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 ADAMTS2O95450 1211 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 FKBP3Q00688 224 aaKnown RBP19.59■□□□□ 0.73
PRKCB-202ENST00000321728 BYSLQ13895 437 aaKnown RBP19.59■□□□□ 0.73
PRKCB-202ENST00000321728 ERFEQ4G0M1 354 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 AGBL2Q5U5Z8 902 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 ARHGAP27Q6ZUM4 889 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 ARMC9Q7Z3E5 817 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 SCFD2Q8WU76 684 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 DDX12PQ92771 950 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 TATDN2Q93075 761 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 DYNLL2Q96FJ2 89 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 ZMYND12Q9H0C1 365 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 MKNK2Q9HBH9 465 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 STK17AQ9UEE5 414 aa19.59■□□□□ 0.73
PRKCB-202ENST00000321728 RREB1Q92766 1687 aa19.58■□□□□ 0.73
PRKCB-202ENST00000321728 ZNF335Q9H4Z2 1342 aaPredicted RBP19.58■□□□□ 0.73
PRKCB-202ENST00000321728 GCFC2P16383 781 aaKnown RBP19.58■□□□□ 0.73
PRKCB-202ENST00000321728 MSL1Q68DK7 614 aa19.58■□□□□ 0.73
PRKCB-202ENST00000321728 MYOCDQ8IZQ8 938 aa19.58■□□□□ 0.73
PRKCB-202ENST00000321728 PBKQ96KB5 322 aa19.58■□□□□ 0.73
PRKCB-202ENST00000321728 PNMA5Q96PV4 448 aa19.58■□□□□ 0.73
PRKCB-202ENST00000321728 C6orf50Q9HD87 102 aa19.58■□□□□ 0.73
PRKCB-202ENST00000321728 C5orf60A6NFR6 353 aa19.58■□□□□ 0.72
PRKCB-202ENST00000321728 KRIT1O00522 736 aa19.58■□□□□ 0.72
PRKCB-202ENST00000321728 NTSR2O95665 410 aa19.58■□□□□ 0.72
PRKCB-202ENST00000321728 PRDX5P30044 214 aa19.58■□□□□ 0.72
PRKCB-202ENST00000321728 IFFO1Q0D2I5 559 aa19.58■□□□□ 0.72
PRKCB-202ENST00000321728 ITPK1Q13572 414 aa19.58■□□□□ 0.72
PRKCB-202ENST00000321728 FAM84BQ96KN1 310 aaPredicted RBP19.58■□□□□ 0.72
PRKCB-202ENST00000321728 CCDC87Q9NVE4 849 aa19.58■□□□□ 0.72
PRKCB-202ENST00000321728 AMACRQ9UHK6 382 aa19.58■□□□□ 0.72
PRKCB-202ENST00000321728 FRMD3A2A2Y4 597 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 PGRMC1O00264 195 aaKnown RBP19.57■□□□□ 0.72
PRKCB-202ENST00000321728 ECM2O94769 699 aaPredicted RBP19.57■□□□□ 0.72
PRKCB-202ENST00000321728 CAMTA2O94983 1202 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 SLC8A1P32418 973 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 EPS15P42566 896 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 USP11P51784 963 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 CLNS1AP54105 237 aaKnown RBP19.57■□□□□ 0.72
PRKCB-202ENST00000321728 PROM2Q8N271 834 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 BIN2Q9UBW5 565 aaPredicted RBP19.57■□□□□ 0.72
PRKCB-202ENST00000321728 NOC2LQ9Y3T9 749 aaKnown RBP19.57■□□□□ 0.72
PRKCB-202ENST00000321728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.57■□□□□ 0.72
PRKCB-202ENST00000321728 NHSL1Q5SYE7 1610 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 CLGNO14967 610 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 TSPY3P0CV98 308 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 TSPY8P0CW00 308 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 DHX9Q08211 1270 aaKnown RBP19.57■□□□□ 0.72
PRKCB-202ENST00000321728 SF3A3Q12874 501 aaKnown RBP eCLIP19.57■□□□□ 0.72
PRKCB-202ENST00000321728 XRCC4Q13426 336 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 UBE4AQ14139 1066 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 CALCRLQ16602 461 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 SBK1Q52WX2 424 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 LACTB2Q53H82 288 aaPredicted RBP19.57■□□□□ 0.72
PRKCB-202ENST00000321728 SOGA3Q5TF21 947 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 DNAAF5Q86Y56 855 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 MDM1Q8TC05 714 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 ACTRT1Q8TDG2 376 aa19.57■□□□□ 0.72
PRKCB-202ENST00000321728 GOLGB1Q14789 3259 aaKnown RBP19.56■□□□□ 0.72
PRKCB-202ENST00000321728 KLRF2D3W0D1 207 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 CES2O00748 559 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 PAEPP09466 180 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 GNA11P29992 359 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 MAGEC3Q8TD91 643 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 CCT6BQ92526 530 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 CELF1Q92879 486 aaKnown RBP19.56■□□□□ 0.72
PRKCB-202ENST00000321728 PSMD1Q99460 953 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 VAT1LQ9HCJ6 419 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 TBC1D7Q9P0N9 293 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 MYH4Q9Y623 1939 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 POTEMA6NI47 508 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 RPSAP08865 295 aaKnown RBP19.56■□□□□ 0.72
PRKCB-202ENST00000321728 MRPL12P52815 198 aaKnown RBP19.56■□□□□ 0.72
PRKCB-202ENST00000321728 RAD54LQ92698 747 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 TBC1D31Q96DN5 1066 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.56■□□□□ 0.72
PRKCB-202ENST00000321728 DPH5Q9H2P9 285 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 SWAP70Q9UH65 585 aa19.56■□□□□ 0.72
PRKCB-202ENST00000321728 ITGA4P13612 1032 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 PPP1R7Q15435 360 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 TMEM266Q2M3C6 531 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 TMC3Q7Z5M5 1100 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 SNX29Q8TEQ0 813 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 BAIAP2L1Q9UHR4 511 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 DRD4P21917 467 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 GBP2P32456 591 aaPredicted RBP19.55■□□□□ 0.72
PRKCB-202ENST00000321728 PSMD2Q13200 908 aa19.55■□□□□ 0.72
PRKCB-202ENST00000321728 IFI16Q16666 785 aaKnown RBP19.55■□□□□ 0.72
PRKCB-202ENST00000321728 HIBCHQ6NVY1 386 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms