RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 NR2F2P24468 414 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 LEKR1Q6ZMV7 388 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 TARSL2A2RTX5 802 aaKnown RBP19.19■□□□□ 0.66
COL9A1-201ENST00000320755 SYF2O95926 243 aaKnown RBP19.19■□□□□ 0.66
COL9A1-201ENST00000320755 PAFAH1B1P43034 410 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 ICA1Q05084 483 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 CEP72Q9P209 647 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 SUGT1Q9Y2Z0 365 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 SFI1A8K8P3 1242 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 F5H6K3 240 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 MEIS2O14770 477 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 PRPF6O94906 941 aaKnown RBP19.19■□□□□ 0.66
COL9A1-201ENST00000320755 KLRC3Q07444 240 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 TCERG1LQ5VWI1 586 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 HHIPL2Q6UWX4 724 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 TLR10Q9BXR5 811 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 PACSIN1Q9BY11 444 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 ABCB11O95342 1321 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 ACTN2P35609 894 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 KLHL30Q0D2K2 578 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 KCNH2Q12809 1159 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 ASTE1Q2TB18 679 aaPredicted RBP19.19■□□□□ 0.66
COL9A1-201ENST00000320755 CCDC17Q96LX7 622 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 DHX36Q9H2U1 1008 aaKnown RBP19.19■□□□□ 0.66
COL9A1-201ENST00000320755 PCDHA2Q9Y5H9 948 aa19.19■□□□□ 0.66
COL9A1-201ENST00000320755 A0A087X0T9 212 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 CETN3O15182 167 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 PALMO75781 387 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 FAM228BP0C875 321 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 KIAA0753Q2KHM9 967 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 DCAF17Q5H9S7 520 aaPredicted RBP19.18■□□□□ 0.66
COL9A1-201ENST00000320755 TRIM59Q8IWR1 403 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 KCNMB3Q9NPA1 279 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 MED4Q9NPJ6 270 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 SPDYE3A6NKU9 549 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 RSPH10B2B2RC85 870 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 LCA5LO95447 670 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 SERPING1P05155 500 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 RSPH10BP0C881 870 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 TCP1P17987 556 aaKnown RBP19.18■□□□□ 0.66
COL9A1-201ENST00000320755 ZNF76P36508 570 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 KLHDC7AQ5VTJ3 777 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 FOXR1Q6PIV2 292 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 SFR1Q86XK3 245 aa19.18■□□□□ 0.66
COL9A1-201ENST00000320755 RBM12Q9NTZ6 932 aaKnown RBP19.18■□□□□ 0.66
COL9A1-201ENST00000320755 KLRG2A4D1S0 409 aaPredicted RBP19.17■□□□□ 0.66
COL9A1-201ENST00000320755 FAM86B1E9PN63 330 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 FAM86B2P0C5J1 330 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 SLC9A1P19634 815 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 KLRC1P26715 233 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 USP11P51784 963 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 SH3BP5LQ7L8J4 393 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 KCTD10Q9H3F6 313 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 DNM3Q9UQ16 869 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 LY75O60449 1722 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 KCTD19Q17RG1 926 aaPredicted RBP19.17■□□□□ 0.66
COL9A1-201ENST00000320755 SIAH1Q8IUQ4 282 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 REEP2Q9BRK0 252 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 PI4KBQ9UBF8 816 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 FAM198AQ9UFP1 575 aa19.17■□□□□ 0.66
COL9A1-201ENST00000320755 NPR1P16066 1061 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 SLC12A3P55017 1021 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 FBXO11Q86XK2 927 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 CEP63Q96MT8 703 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 AMNQ9BXJ7 453 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 BHMT2Q9H2M3 363 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 IKZF4Q9H2S9 585 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 GOLPH3Q9H4A6 298 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 PSD3Q9NYI0 1048 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 RGL1Q9NZL6 768 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 TULP1O00294 542 aaPredicted RBP19.16■□□□□ 0.66
COL9A1-201ENST00000320755 CLIC2O15247 247 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 MYBP10242 640 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 ADAMTSL1Q8N6G6 1762 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 SSU72P8A0A1W2PR75 194 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 ESYT3A0FGR9 886 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 CHMP2AO43633 222 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 GIT2Q14161 759 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 HYIQ5T013 277 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 SLFN12Q8IYM2 578 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 GOLGA5Q8TBA6 731 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 SPAG5Q96R06 1193 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 TDRD3Q9H7E2 651 aaKnown RBP19.16■□□□□ 0.66
COL9A1-201ENST00000320755 HDAC9Q9UKV0 1011 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 MYH4Q9Y623 1939 aa19.16■□□□□ 0.66
COL9A1-201ENST00000320755 GOLGA6BA6NDN3 693 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 NDUFB10O96000 172 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 MMP10P09238 476 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 UBXN2AP68543 259 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 KCNA1Q09470 495 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 HAUS3Q68CZ6 603 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 MMGT1Q8N4V1 131 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 MSL3Q8N5Y2 521 aaKnown RBP19.15■□□□□ 0.66
COL9A1-201ENST00000320755 AFAP1L1Q8TED9 768 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 PIGOQ8TEQ8 1089 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 VIPAS39Q9H9C1 493 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 GNA14O95837 355 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 GH2P01242 217 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 ALDH1B1P30837 517 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 ASIC2Q16515 512 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms