RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 TPCN1Q9ULQ1 816 aa11.33□□□□□ -0.59
CCDC65-202ENST00000320516 TET1Q8NFU7 2136 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 NFASCO94856 1347 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 IGLV3-22A0A075B6J6 115 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 C17orf102A2RUQ5 167 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 EDIL3O43854 480 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 SELPP16109 830 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 SCRN1Q12765 414 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 ITGB3BPQ13352 177 aaPredicted RBP11.33□□□□□ -0.6
CCDC65-202ENST00000320516 UTP14CQ5TAP6 766 aaKnown RBP11.33□□□□□ -0.6
CCDC65-202ENST00000320516 MCTP2Q6DN12 878 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 LRRC8DQ7L1W4 858 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 DEFB128Q7Z7B8 93 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 CCDC155Q8N6L0 562 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 CCDC148Q8NFR7 591 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 RASGRP4Q8TDF6 673 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 SEMA6BQ9H3T3 888 aa11.33□□□□□ -0.6
CCDC65-202ENST00000320516 JPH1Q9HDC5 661 aaPredicted RBP11.33□□□□□ -0.6
CCDC65-202ENST00000320516 ZNF215Q9UL58 517 aaPredicted RBP11.33□□□□□ -0.6
CCDC65-202ENST00000320516 TMEM265A0A087WTH1 108 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 CPLX1O14810 134 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 TREHO43280 583 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 PFKFB2O60825 505 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 EIF5BO60841 1220 aaKnown RBP11.32□□□□□ -0.6
CCDC65-202ENST00000320516 LGR5O75473 907 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 DEXIO95424 95 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 DNAJB2P25686 324 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 PBX2P40425 430 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 SSRP1Q08945 709 aaKnown RBP11.32□□□□□ -0.6
CCDC65-202ENST00000320516 STK3Q13188 491 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 TRIM22Q8IYM9 498 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 BICD2Q8TD16 824 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 ATP6V0A1Q93050 837 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 PCYT2Q99447 389 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 PBX4Q9BYU1 374 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 MTIF3Q9H2K0 278 aaKnown RBP11.32□□□□□ -0.6
CCDC65-202ENST00000320516 SETD4Q9NVD3 440 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 SLC9A2Q9UBY0 812 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 EMSYQ7Z589 1322 aa11.32□□□□□ -0.6
CCDC65-202ENST00000320516 NBNO60934 754 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 ATG7O95352 703 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 PARNO95453 639 aaKnown RBP11.31□□□□□ -0.6
CCDC65-202ENST00000320516 CXCL10P02778 98 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 CIITAP33076 1130 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 AK2P54819 239 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 MBTPS1Q14703 1052 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 NPY5RQ15761 445 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 ZNF618Q5T7W0 954 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 FAM161BQ96MY7 647 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 STXBP5LQ9Y2K9 1186 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 NRCAMQ92823 1304 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 M0R2N6 131 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 DHX15O43143 795 aaKnown RBP11.31□□□□□ -0.6
CCDC65-202ENST00000320516 GNAT1P11488 350 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 ZNF76P36508 570 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 ACTR2P61160 394 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 CPLX2Q6PUV4 134 aaKnown RBP11.31□□□□□ -0.6
CCDC65-202ENST00000320516 PLA2G4DQ86XP0 818 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 FAM177A1Q8N128 213 aaPredicted RBP11.31□□□□□ -0.6
CCDC65-202ENST00000320516 LMBR1Q8WVP7 490 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 LENG9Q96B70 501 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 TIFAQ96CG3 184 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 AIFM3Q96NN9 605 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 SDF4Q9BRK5 362 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 SMARCAD1Q9H4L7 1026 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 ERAP1Q9NZ08 941 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 SLC4A7Q9Y6M7 1214 aa11.31□□□□□ -0.6
CCDC65-202ENST00000320516 CHD9Q3L8U1 2897 aa11.3□□□□□ -0.6
CCDC65-202ENST00000320516 IGKV6D-21A0A0A0MT36 114 aa11.3□□□□□ -0.6
CCDC65-202ENST00000320516 RBAK-RBAKDNI3L0D1 243 aa11.3□□□□□ -0.6
CCDC65-202ENST00000320516 CTDNEP1O95476 244 aa11.3□□□□□ -0.6
CCDC65-202ENST00000320516 CCNE2O96020 404 aa11.3□□□□□ -0.6
CCDC65-202ENST00000320516 ACTN1P12814 892 aa11.3□□□□□ -0.6
CCDC65-202ENST00000320516 NLRP5P59047 1200 aa11.3□□□□□ -0.6
CCDC65-202ENST00000320516 ANKRD1Q15327 319 aa11.3□□□□□ -0.6
CCDC65-202ENST00000320516 C8orf34Q49A92 452 aa11.3□□□□□ -0.6
CCDC65-202ENST00000320516 DAGLBQ8NCG7 672 aa11.3□□□□□ -0.6
CCDC65-202ENST00000320516 CDX2Q99626 313 aaPredicted RBP11.3□□□□□ -0.6
CCDC65-202ENST00000320516 SLKQ9H2G2 1235 aaPredicted RBP11.3□□□□□ -0.6
CCDC65-202ENST00000320516 PCDHA4Q9UN74 947 aa11.3□□□□□ -0.6
CCDC65-202ENST00000320516 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
CCDC65-202ENST00000320516 ZBBXA8MT70 800 aa11.29□□□□□ -0.6
CCDC65-202ENST00000320516 IPO5O00410 1097 aaKnown RBP11.29□□□□□ -0.6
CCDC65-202ENST00000320516 CAND2O75155 1236 aa11.29□□□□□ -0.6
CCDC65-202ENST00000320516 BAIAP3O94812 1187 aa11.29□□□□□ -0.6
CCDC65-202ENST00000320516 MARK3P27448 753 aa11.29□□□□□ -0.6
CCDC65-202ENST00000320516 THPOP40225 353 aa11.29□□□□□ -0.6
CCDC65-202ENST00000320516 SETQ01105 290 aaPredicted RBP11.29□□□□□ -0.6
CCDC65-202ENST00000320516 ME3Q16798 604 aa11.29□□□□□ -0.6
CCDC65-202ENST00000320516 TCTN1Q2MV58 587 aa11.29□□□□□ -0.6
CCDC65-202ENST00000320516 GLG1Q92896 1179 aa11.29□□□□□ -0.6
CCDC65-202ENST00000320516 FTOQ9C0B1 505 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC65-202ENST00000320516 YBX2Q9Y2T7 364 aaKnown RBP11.29□□□□□ -0.6
CCDC65-202ENST00000320516 MBLAC1A4D2B0 266 aaPredicted RBP11.28□□□□□ -0.6
CCDC65-202ENST00000320516 RSPH10B2B2RC85 870 aa11.28□□□□□ -0.6
CCDC65-202ENST00000320516 CDKL5O76039 1030 aa11.28□□□□□ -0.6
CCDC65-202ENST00000320516 LARGE1O95461 756 aa11.28□□□□□ -0.6
CCDC65-202ENST00000320516 RSPH10BP0C881 870 aa11.28□□□□□ -0.6
CCDC65-202ENST00000320516 ATP2A2P16615 1042 aaKnown RBP11.28□□□□□ -0.6
CCDC65-202ENST00000320516 USP11P51784 963 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms