RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 CLEC4DQ8WXI8 215 aa3.75□□□□□ -1.81
SCAMP1-201ENST00000320280 TNFRSF25Q93038 417 aa3.75□□□□□ -1.81
SCAMP1-201ENST00000320280 ALG1Q9BT22 464 aa3.75□□□□□ -1.81
SCAMP1-201ENST00000320280 RAB34Q9BZG1 259 aa3.75□□□□□ -1.81
SCAMP1-201ENST00000320280 UPF3BQ9BZI7 483 aaKnown RBP3.75□□□□□ -1.81
SCAMP1-201ENST00000320280 RNF146Q9NTX7 359 aa3.75□□□□□ -1.81
SCAMP1-201ENST00000320280 RBPJLQ9UBG7 517 aa3.75□□□□□ -1.81
SCAMP1-201ENST00000320280 CFAP45Q9UL16 551 aa3.75□□□□□ -1.81
SCAMP1-201ENST00000320280 SPDYE3A6NKU9 549 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 PPP6R2O75170 966 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 NAPAP54920 295 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 SP3Q02447 781 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 TMEM132BQ14DG7 1078 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 NONOQ15233 471 aaKnown RBP eCLIP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 ZNF792Q3KQV3 632 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 TREML2Q5T2D2 321 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 WWC2Q6AWC2 1192 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 FERMT2Q96AC1 680 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 TRERF1Q96PN7 1200 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 MMP19Q99542 508 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 RIT2Q99578 217 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 C1QTNF2Q9BXJ5 285 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 SLC26A6Q9BXS9 759 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 ZNF408Q9H9D4 720 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 CUEDC1Q9NWM3 386 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 RNF186Q9NXI6 227 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 KCNG1Q9UIX4 513 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 PCDHA1Q9Y5I3 950 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 FAM196BA6NMK8 535 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 IGF2BP3O00425 579 aaKnown RBP eCLIP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 NMT2O60551 498 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 BRD1O95696 1058 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 HOXD8P13378 290 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 AMPD1P23109 780 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 CST5P28325 142 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 GJB2P29033 226 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 SLC26A2P50443 739 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 LACTBP83111 547 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 ATP2B2Q01814 1243 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 PTPN11Q06124 597 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 ST3GAL1Q11201 340 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 IKQ13123 557 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 HSP90AA2PQ14568 343 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 SNRNP48Q6IEG0 339 aaKnown RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 RNF207Q6ZRF8 634 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 DNAJC5GQ8N7S2 189 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 ATG4CQ96DT6 458 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 P2RX7Q99572 595 aaKnown RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 TIPINQ9BVW5 301 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 MOV10L1Q9BXT6 1211 aaKnown RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 UPF3AQ9H1J1 476 aaKnown RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 CUEDC2Q9H467 287 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 PSTPIP2Q9H939 334 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 TBC1D22BQ9NU19 505 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 CYP39A1Q9NYL5 469 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 COL1A2P08123 1366 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 STX6O43752 255 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 EIF3JO75822 258 aaKnown RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 PLEKHA8P1O95397 391 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 BAG4O95429 457 aaKnown RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 MYL1P05976 194 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 HSP90AA1P07900 732 aaKnown RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 ZSCAN22P10073 491 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 FDPSP14324 419 aaKnown RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 SFNP31947 248 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 ABL2P42684 1182 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 NASPP49321 788 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 NLRP5P59047 1200 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 IQSEC1Q6DN90 963 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 KCTD1Q719H9 257 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 NOSTRINQ8IVI9 506 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 CCDC83Q8IWF9 413 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 SMAP1Q8IYB5 467 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 FAM43AQ8N2R8 423 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 STAG2Q8N3U4 1231 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 RNF217Q8TC41 542 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 ZNF526Q8TF50 670 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 CCDC34Q96HJ3 373 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 PIGSQ96S52 555 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 PTPN18Q99952 460 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 ZKSCAN3Q9BRR0 538 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 WDR11Q9BZH6 1224 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 SCAND2PQ9GZW5 306 aaPredicted RBP3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 TCEAL9Q9UHQ7 104 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 UBIAD1Q9Y5Z9 338 aa3.74□□□□□ -1.81
SCAMP1-201ENST00000320280 KDM3AQ9Y4C1 1321 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 FAM237AA0A1B0GTK4 181 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 CCDC194A0A1B0GVG4 234 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 A0A1W2PRU2 124 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 SMCO2A6NFE2 343 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 H3BQV1 296 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 FIBPO43427 364 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 CABYRO75952 493 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 ADH1AP07327 375 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 XRCC6P12956 609 aaKnown RBP eCLIP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 PDIA5Q14554 519 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 KIAA1755Q5JYT7 1200 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 MFSD14CQ5VZR4 134 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 LARP1BQ659C4 914 aaKnown RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 KRT40Q6A162 431 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms