RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 GCLCP48506 637 aaPredicted RBP16.38■□□□□ 0.21
SCAP-202ENST00000320017 DNM2P50570 870 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 PTGDRQ13258 359 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 UBE3CQ15386 1083 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 WASF1Q92558 559 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 LBHD1Q9BQE6 289 aaPredicted RBP16.38■□□□□ 0.21
SCAP-202ENST00000320017 TUBGCP2Q9BSJ2 902 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 TLR10Q9BXR5 811 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 PLCB1Q9NQ66 1216 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 MRC1P22897 1456 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 PPFIA2O75334 1257 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 IFNAR1P17181 557 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 RFC5P40937 340 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 NLRP5P59047 1200 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 IFIT1BQ5T764 474 aaKnown RBP16.38■□□□□ 0.21
SCAP-202ENST00000320017 RNF220Q5VTB9 566 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 ZNF34Q8IZ26 560 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 RPS6KC1Q96S38 1066 aa16.38■□□□□ 0.21
SCAP-202ENST00000320017 PP2D1A8MPX8 630 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 SHBGP04278 402 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 RAD23BP54727 409 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 RIPK1Q13546 671 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 IFI16Q16666 785 aaKnown RBP16.37■□□□□ 0.21
SCAP-202ENST00000320017 CSGALNACT2Q8N6G5 542 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 LPIN2Q92539 896 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 GPKOWQ92917 476 aaPredicted RBP eCLIP16.37■□□□□ 0.219e-6■■□□□ 14.5
SCAP-202ENST00000320017 NOC4LQ9BVI4 516 aaKnown RBP16.37■□□□□ 0.21
SCAP-202ENST00000320017 AP1M1Q9BXS5 423 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 AATFQ9NY61 560 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCAP-202ENST00000320017 AFDNP55196 1824 aaKnown RBP16.37■□□□□ 0.21
SCAP-202ENST00000320017 C5orf60A6NFR6 353 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 ERVV-1B6SEH8 477 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 DEXIO95424 95 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 HSPA9P38646 679 aaKnown RBP16.37■□□□□ 0.21
SCAP-202ENST00000320017 ITIH3Q06033 890 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 CHRNDQ07001 517 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 CACNA2D4Q7Z3S7 1137 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 MYLK4Q86YV6 388 aaPredicted RBP16.37■□□□□ 0.21
SCAP-202ENST00000320017 CPVLQ9H3G5 476 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 ATP8A1Q9Y2Q0 1164 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 AFF2P51816 1311 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 MYH10P35580 1976 aa16.37■□□□□ 0.21
SCAP-202ENST00000320017 hCG_2014768A0A024R1R8 64 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 LRRC10BA6NIK2 292 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 SRRM3A6NNA2 597 aaPredicted RBP16.36■□□□□ 0.21
SCAP-202ENST00000320017 H7C1D1 291 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 DHX9Q08211 1270 aaKnown RBP16.36■□□□□ 0.21
SCAP-202ENST00000320017 FAM196AQ6ZSG2 479 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 RRAGAQ7L523 313 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 GALNT15Q8N3T1 639 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 CNKSR1Q969H4 720 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 MTMR8Q96EF0 704 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 KRT23Q9C075 422 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 INTS9Q9NV88 658 aaKnown RBP16.36■□□□□ 0.21
SCAP-202ENST00000320017 PMS1P54277 932 aaKnown RBP16.36■□□□□ 0.21
SCAP-202ENST00000320017 ERVK-9P63128 1117 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 ARID5AQ03989 594 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 GFPT1Q06210 699 aaPredicted RBP16.36■□□□□ 0.21
SCAP-202ENST00000320017 SLC51AQ86UW1 340 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 SEPT12Q8IYM1 358 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 ZNF579Q8NAF0 562 aaKnown RBP16.36■□□□□ 0.21
SCAP-202ENST00000320017 RETREG2Q8NC44 543 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 SHISA4Q96DD7 197 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 RBM41Q96IZ5 413 aaKnown RBP16.36■□□□□ 0.21
SCAP-202ENST00000320017 NSRP1Q9H0G5 558 aaKnown RBP16.36■□□□□ 0.21
SCAP-202ENST00000320017 LAMA4Q16363 1823 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 A6NHS1 94 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 CEP104O60308 925 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 TNFRSF8P28908 595 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 NUGGCQ68CJ6 796 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 MREGQ8N565 214 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 IFT74Q96LB3 600 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 SALL4Q9UJQ4 1053 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 XDHP47989 1333 aa16.36■□□□□ 0.21
SCAP-202ENST00000320017 KCNK3O14649 394 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 CREB3O43889 395 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 PALMO75781 387 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 CLSTN1O94985 981 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 RPN1P04843 607 aaKnown RBP16.35■□□□□ 0.21
SCAP-202ENST00000320017 GSTA1P08263 222 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 MSH2P43246 934 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 NCALDP61601 193 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 ZNF268Q14587 947 aaPredicted RBP16.35■□□□□ 0.21
SCAP-202ENST00000320017 UAP1Q16222 522 aaPredicted RBP16.35■□□□□ 0.21
SCAP-202ENST00000320017 DBN1Q16643 649 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 CELF1Q92879 486 aaKnown RBP16.35■□□□□ 0.21
SCAP-202ENST00000320017 PRMT1Q99873 361 aaKnown RBP16.35■□□□□ 0.21
SCAP-202ENST00000320017 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.35■□□□□ 0.21
SCAP-202ENST00000320017 FAM129AQ9BZQ8 928 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 SLC12A4Q9UP95 1085 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 TNS2Q63HR2 1409 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 TCRBV5S4A2TA0A5A2 114 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 PSMA7O14818 248 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 ALDH3A1P30838 453 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 GPR101Q96P66 508 aaPredicted RBP16.35■□□□□ 0.21
SCAP-202ENST00000320017 DDX23Q9BUQ8 820 aaKnown RBP16.35■□□□□ 0.21
SCAP-202ENST00000320017 USP17L12C9JPN9 530 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 USP17L21D6R901 530 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 UQCRFS1P1P0C7P4 283 aa16.35■□□□□ 0.21
SCAP-202ENST00000320017 CYP2D6P10635 497 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms