RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 POTEGQ6S5H5 508 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 DHX37Q8IY37 1157 aaKnown RBP17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 TRPV1Q8NER1 839 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 STAMQ92783 540 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 ERCC4Q92889 916 aaPredicted RBP17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 SPATA33Q96N06 139 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 RIT2Q99578 217 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 SH2D3AQ9BRG2 576 aa17.31■□□□□ 0.36
PDLIM5-202ENST00000318007 ZNF865P0CJ78 1059 aaPredicted RBP17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 CCND3P30281 292 aaPredicted RBP17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 ICAM3P32942 547 aa17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 TXLNAP40222 546 aa17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 SYKP43405 635 aa17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 PPP2R5CQ13362 524 aa17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 CAVIN1Q6NZI2 390 aaKnown RBP17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 CCDC62Q6P9F0 684 aa17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 TPH2Q8IWU9 490 aa17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 DYDC2Q96IM9 177 aa17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 CDK5RAP3Q96JB5 506 aa17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 EIF2AK1Q9BQI3 630 aaKnown RBP17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 GZF1Q9H116 711 aaPredicted RBP17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 DISC1Q9NRI5 854 aa17.3■□□□□ 0.36
PDLIM5-202ENST00000318007 A0A1W2PQ27 194 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 A0A1W2PQ64 194 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 A0A1W2PQD8 194 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 NOP56O00567 594 aaKnown RBP17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 ZBTB39O15060 712 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 TRAK2O60296 914 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 CHMP4BP1P59074 171 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 ACTR2P61160 394 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 TNFAIP2Q03169 654 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 TRIM50Q86XT4 487 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 GRAMD1CQ8IYS0 662 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 ZNF579Q8NAF0 562 aaKnown RBP17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 LRRC15Q8TF66 581 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 WRAP73Q9P2S5 460 aaPredicted RBP17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 TMEM150BA6NC51 233 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 BACH1O14867 736 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 HSPA8P11142 646 aaKnown RBP17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 PLCG1P19174 1290 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 SNW1Q13573 536 aaKnown RBP17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 NEDD9Q14511 834 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 UGCGQ16739 394 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 CATSPER3Q86XQ3 398 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 KIAA1024Q9UPX6 916 aa17.29■□□□□ 0.36
PDLIM5-202ENST00000318007 LOC102724159A0A0B4J2E5 919 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 ZNF202O95125 648 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 TGFB3P10600 412 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 FAM160A1Q05DH4 1040 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 PDIA5Q14554 519 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 PWP2Q15269 919 aaKnown RBP17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 LONRF3Q496Y0 759 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 CELF3Q5SZQ8 465 aaKnown RBP17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 UTP14CQ5TAP6 766 aaKnown RBP17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 MSL3Q8N5Y2 521 aaKnown RBP17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 PIGOQ8TEQ8 1089 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 PPP1R13LQ8WUF5 828 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 AK8Q96MA6 479 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 LXNQ9BS40 222 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 DDX19AQ9NUU7 478 aaKnown RBP17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 WDR64B1ANS9 1081 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 DYNC1LI2O43237 492 aaPredicted RBP17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 INHAP05111 366 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 CYBAP13498 195 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 MARK3P27448 753 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 CASP1P29466 404 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 TCF7P36402 384 aaPredicted RBP17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 STAT6P42226 847 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 KRT76Q01546 638 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 ARHGEF6Q15052 776 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 SWSAP1Q6NVH7 229 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 METTL7BQ6UX53 244 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 KCNK18Q7Z418 384 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 CCDC60Q8IWA6 550 aaPredicted RBP17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 OR6J1Q8NGC5 347 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 AFG1LQ8WV93 481 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 CALML4Q96GE6 196 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 SENP7Q9BQF6 1050 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 GABBR1Q9UBS5 961 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 SERTAD1Q9UHV2 236 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 HPSEQ9Y251 543 aa17.28■□□□□ 0.36
PDLIM5-202ENST00000318007 E9PMD0 336 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 HMGCRP04035 888 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 SSBP05455 408 aaKnown RBP eCLIP17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 GRK4P32298 578 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 AFMP43652 599 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 PSMC6P62333 389 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 ARHGAP1Q07960 439 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 GRB10Q13322 594 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 RRAGBQ5VZM2 374 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 HAUS3Q68CZ6 603 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 KCNV1Q6PIU1 500 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 B3GNT9Q6UX72 402 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 TLK2Q86UE8 772 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 FMR1NBQ8N0W7 255 aaPredicted RBP17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 ERMNQ8TAM6 284 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 PNMA5Q96PV4 448 aa17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 BMP2KQ9NSY1 1161 aaPredicted RBP17.27■□□□□ 0.36
PDLIM5-202ENST00000318007 NFASCO94856 1347 aa17.26■□□□□ 0.35
PDLIM5-202ENST00000318007 KINO60870 393 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms