RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 WDR18Q9BV38 432 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 A1CFQ9NQ94 594 aaKnown RBP14.49□□□□□ -0.09
CPNE1-201ENST00000317677 RMND1Q9NWS8 449 aa14.49□□□□□ -0.09
CPNE1-201ENST00000317677 TRPM7Q96QT4 1865 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 ABCB11O95342 1321 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 MSH4O15457 936 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 ICAM1P05362 532 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 USP8P40818 1118 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 MAP3K9P80192 1104 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 LONRF2Q1L5Z9 754 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 NBPF20Q3BBV1 942 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 KRT79Q5XKE5 535 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 EP400NLQ6ZTU2 488 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 ADSSL1Q8N142 457 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 ZC3H15Q8WU90 426 aaKnown RBP14.48□□□□□ -0.09
CPNE1-201ENST00000317677 RAD54LQ92698 747 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 WNK4Q96J92 1243 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 CARD6Q9BX69 1037 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 PARD6BQ9BYG5 372 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 COL20A1Q9P218 1284 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 STK17AQ9UEE5 414 aa14.48□□□□□ -0.09
CPNE1-201ENST00000317677 MRPL11Q9Y3B7 192 aaKnown RBP14.48□□□□□ -0.09
CPNE1-201ENST00000317677 GCOM1H8Y6P7 765 aaPredicted RBP14.47□□□□□ -0.09
CPNE1-201ENST00000317677 PPFIA4O75335 1185 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 SERPINC1P01008 464 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 POLR2MP0CAP2 368 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 PMS1P54277 932 aaKnown RBP14.47□□□□□ -0.09
CPNE1-201ENST00000317677 TUBB4BP68371 445 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 UBXN2AP68543 259 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 ARMCX5Q6P1M9 558 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 SLC30A10Q6XR72 485 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 PRPF38AQ8NAV1 312 aaKnown RBP14.47□□□□□ -0.09
CPNE1-201ENST00000317677 GIMAP8Q8ND71 665 aaPredicted RBP14.47□□□□□ -0.09
CPNE1-201ENST00000317677 LARP4BQ92615 738 aaKnown RBP14.47□□□□□ -0.09
CPNE1-201ENST00000317677 HPS3Q969F9 1004 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 RAB34Q9BZG1 259 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 SLC38A10Q9HBR0 1119 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 VAV3Q9UKW4 847 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 TRIM49BA6NDI0 452 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 NFIBO00712 420 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 MED24O75448 989 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 FCER1AP12319 257 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 SFPQP23246 707 aaKnown RBP eCLIP14.47□□□□□ -0.098e-7■□□□□ 10.3
CPNE1-201ENST00000317677 HSD17B4P51659 736 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 VSTM4Q8IW00 320 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 NELFBQ8WX92 580 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 HOOK2Q96ED9 719 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 RPAP3Q9H6T3 665 aaPredicted RBP14.47□□□□□ -0.09
CPNE1-201ENST00000317677 RAVER2Q9HCJ3 691 aaKnown RBP14.47□□□□□ -0.09
CPNE1-201ENST00000317677 RWDD2AQ9UIY3 292 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 CCPG1Q9ULG6 757 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 PTPRFP10586 1907 aa14.47□□□□□ -0.09
CPNE1-201ENST00000317677 POTEB3A0JP26 581 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 TBX3O15119 743 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 MARCH6O60337 910 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 EIF3JO75822 258 aaKnown RBP14.46□□□□□ -0.09
CPNE1-201ENST00000317677 BACE1P56817 501 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 ASIC1P78348 528 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 STK4Q13043 487 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 TRAF1Q13077 416 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 PAK1Q13153 545 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 DNAJC21Q5F1R6 531 aaKnown RBP14.46□□□□□ -0.09
CPNE1-201ENST00000317677 POTEBQ6S5H4 581 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 LRRC31Q6UY01 552 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 HDXQ7Z353 690 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 TANGO6Q9C0B7 1094 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 PPP1R9AQ9ULJ8 1098 aa14.46□□□□□ -0.09
CPNE1-201ENST00000317677 PPP1R12AO14974 1030 aaPredicted RBP14.45□□□□□ -0.1
CPNE1-201ENST00000317677 URI1O94763 535 aaPredicted RBP14.45□□□□□ -0.1
CPNE1-201ENST00000317677 CCT6AP40227 531 aaKnown RBP14.45□□□□□ -0.1
CPNE1-201ENST00000317677 PDE4DQ08499 809 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 SV2BQ7L1I2 683 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 SLFN12Q8IYM2 578 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 KIAA0895Q8NCT3 520 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 ZNF280CQ8ND82 737 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 CDK5RAP3Q96JB5 506 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 PPP2R3BQ9Y5P8 575 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 A0A1B0GTH6 734 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 E9PMD0 336 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 CBFA2T2O43439 604 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 USP2O75604 605 aaPredicted RBP14.45□□□□□ -0.1
CPNE1-201ENST00000317677 FLOT1O75955 427 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 SPATA31C1P0DKV0 1188 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 GHRHRQ02643 423 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 EHHADHQ08426 723 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 NR1I3Q14994 352 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 CNNM4Q6P4Q7 775 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 FOXR1Q6PIV2 292 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 DYMQ7RTS9 669 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 IRF2BP1Q8IU81 584 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 CPXCR1Q8N123 301 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.45□□□□□ -0.12e-6■□□□□ 10.3
CPNE1-201ENST00000317677 DNAJC19Q96DA6 116 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 ATG4CQ96DT6 458 aa14.45□□□□□ -0.1
CPNE1-201ENST00000317677 RPTORQ8N122 1335 aa14.44□□□□□ -0.1
CPNE1-201ENST00000317677 PITPNM2Q9BZ72 1349 aa14.44□□□□□ -0.1
CPNE1-201ENST00000317677 POTEB2H3BUK9 544 aa14.44□□□□□ -0.1
CPNE1-201ENST00000317677 EML1O00423 815 aa14.44□□□□□ -0.1
CPNE1-201ENST00000317677 TEX33O43247 280 aa14.44□□□□□ -0.1
CPNE1-201ENST00000317677 PRKG1Q13976 671 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms