RNA–Protein interactions for RNA: ENST00000316227.3

PRIMA1-201, Transcript of proline rich membrane anchor 1, humanhuman

TSL 1 (best) BASIC

Gene PRIMA1, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIMA1-201ENST00000316227 SEPT1Q8WYJ6 367 aa16.2■□□□□ 0.18
PRIMA1-201ENST00000316227 ZNF577Q9BSK1 485 aa16.2■□□□□ 0.18
PRIMA1-201ENST00000316227 SLC9A2Q9UBY0 812 aa16.2■□□□□ 0.18
PRIMA1-201ENST00000316227 TBX21Q9UL17 535 aa16.2■□□□□ 0.18
PRIMA1-201ENST00000316227 KIAA0355O15063 1070 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 MSH4O15457 936 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 CCNE2O96020 404 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 TCF7P36402 384 aaPredicted RBP16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 CHMP4BP1P59074 171 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 MDM2Q00987 491 aaPredicted RBP16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 PTPN11Q06124 597 aaPredicted RBP16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 MFSD10Q14728 455 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 LRIT3Q3SXY7 679 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 FAM47CQ5HY64 1035 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 UTP14CQ5TAP6 766 aaKnown RBP16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 NEK8Q86SG6 692 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 TRIM50Q86XT4 487 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 TDHQ8IZJ6 230 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 TBC1D22BQ9NU19 505 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 TRMT13Q9NUP7 481 aaKnown RBP16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 TMEM39AQ9NV64 488 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 LAMA3Q16787 3333 aa16.19■□□□□ 0.18
PRIMA1-201ENST00000316227 H3BRB1 525 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 B4GALT4O60513 344 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 ITGB8P26012 769 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 ACTR2P61160 394 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 SAFBQ15424 915 aaKnown RBP eCLIP16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 LETM2Q2VYF4 491 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 PPP4R3AQ6IN85 833 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 SESTD1Q86VW0 696 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 SLC5A5Q92911 643 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 PCYT2Q99447 389 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 KATNAL1Q9BW62 490 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 TUT1Q9H6E5 874 aaKnown RBP16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 MTMR10Q9NXD2 777 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 HDAC6Q9UBN7 1215 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 COL6A3P12111 3177 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 DOCK5Q9H7D0 1870 aa16.18■□□□□ 0.18
PRIMA1-201ENST00000316227 DDX39AO00148 427 aaKnown RBP16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 TLR3O15455 904 aaKnown RBP16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 SLC37A4O43826 429 aa16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 LGR5O75473 907 aa16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 ATG7O95352 703 aa16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 GJB2P29033 226 aa16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 C7orf31Q8N865 590 aa16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 ETNPPLQ8TBG4 499 aa16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 GJA10Q969M2 543 aa16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 CTAGE1Q96RT6 745 aa16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 RIT2Q99578 217 aa16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 FOXP1Q9H334 677 aaPredicted RBP16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 DDX25Q9UHL0 483 aaKnown RBP16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 KIF3AQ9Y496 699 aa16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.17■□□□□ 0.18
PRIMA1-201ENST00000316227 WNT7AO00755 349 aa16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 CCNT1O60563 726 aaKnown RBP16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 RAG1P15918 1043 aa16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 GCFC2P16383 781 aaKnown RBP16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 HIC1Q14526 733 aa16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 GDF6Q6KF10 455 aaPredicted RBP16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 ABHD15Q6UXT9 468 aa16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 SNX21Q969T3 373 aa16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 RNPEPQ9H4A4 650 aa16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 KCNMB3Q9NPA1 279 aa16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 GTF2IRD1Q9UHL9 959 aa16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 ZNF215Q9UL58 517 aaPredicted RBP16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 SMC3Q9UQE7 1217 aa16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 STXBP5LQ9Y2K9 1186 aa16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 EMSYQ7Z589 1322 aa16.16■□□□□ 0.18
PRIMA1-201ENST00000316227 IGKV6D-21A0A0A0MT36 114 aa16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 KIF28PB7ZC32 967 aa16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 PSMD10O75832 226 aa16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 SUPT20HL2P0C7V6 817 aa16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 SMIM10L2AP0DMW4 78 aa16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 SMIM10L2BP0DMW5 78 aa16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 CYP2C9P11712 490 aa16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 U2AF2P26368 475 aaKnown RBP eCLIP16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 HOXC8P31273 242 aa16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 KRT76Q01546 638 aa16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 ZNF746Q6NUN9 644 aaPredicted RBP16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 GLG1Q92896 1179 aa16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 NAP1L4Q99733 375 aaKnown RBP16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 NOC4LQ9BVI4 516 aaKnown RBP16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 SMARCAD1Q9H4L7 1026 aa16.15■□□□□ 0.18
PRIMA1-201ENST00000316227 K7ELQ4 463 aaPredicted RBP16.14■□□□□ 0.17
PRIMA1-201ENST00000316227 GAS7O60861 476 aa16.14■□□□□ 0.17
PRIMA1-201ENST00000316227 TIMP1P01033 207 aa16.14■□□□□ 0.17
PRIMA1-201ENST00000316227 ZNF200P98182 395 aaPredicted RBP16.14■□□□□ 0.17
PRIMA1-201ENST00000316227 PTGISQ16647 500 aa16.14■□□□□ 0.17
PRIMA1-201ENST00000316227 LRCH2Q5VUJ6 765 aa16.14■□□□□ 0.17
PRIMA1-201ENST00000316227 B3GNT9Q6UX72 402 aa16.14■□□□□ 0.17
PRIMA1-201ENST00000316227 PLPPR4Q7Z2D5 763 aa16.14■□□□□ 0.17
PRIMA1-201ENST00000316227 NOSTRINQ8IVI9 506 aa16.14■□□□□ 0.17
PRIMA1-201ENST00000316227 HAS1Q92839 578 aa16.14■□□□□ 0.17
PRIMA1-201ENST00000316227 BADQ92934 168 aa16.14■□□□□ 0.17
PRIMA1-201ENST00000316227 ERAP1Q9NZ08 941 aa16.14■□□□□ 0.17
PRIMA1-201ENST00000316227 STAT5BP51692 787 aa16.13■□□□□ 0.17
PRIMA1-201ENST00000316227 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
PRIMA1-201ENST00000316227 CCDC60Q8IWA6 550 aaPredicted RBP16.13■□□□□ 0.17
PRIMA1-201ENST00000316227 SMAP1Q8IYB5 467 aaPredicted RBP16.13■□□□□ 0.17
PRIMA1-201ENST00000316227 FAM20AQ96MK3 541 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms